Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22000 Brassica napus
Aa31LG11G12310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1094 Anthoceros agrestis
Actinidia03274 Actinidia chinensis
Actinidia06798 Actinidia chinensis
Ah.06g195270 Amaranthus hybridus
AL6G28480 Arabidopsis lyrata
Aqoxy3G04197 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1T2QZ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PCAY5Y Arachis hypogaea
AT5G17410 Arabidopsis thaliana
ATR1096G007 Amborella trichopoda
Atru.chr12.1671 Acer truncatum
Atru.chr4.1877 Acer truncatum
AUR62000278 Chenopodium quinoa
AUR62006625 Chenopodium quinoa
BcaB01g04935 Brassica carinata
BcaB01g05202 Brassica carinata
BcaB08g36773 Brassica carinata
BolC3t13463H Brassica oleracea
BolC9t58815H Brassica oleracea
BraA03t10156Z Brassica rapa
BraA03t14759Z Brassica rapa
BraA10t44257Z Brassica rapa
C02p31010 Brassica napus
C09p59750 Brassica napus
CAN.G809.91 Capsicum annuum
CANSAT54G2676 Cannabis sativa
CARHR195800 Cardamine hirsuta
Carub.0006s1563 Capsella rubella
Ca_23185_v3 Cicer arietinum L.
Ca_30805_v3 Cicer arietinum L.
CBR_g50760 Chara braunii
CBR_g50761 Chara braunii
Cc09_g04250 Coffea canephora
CDE02G0214 Ceratophyllum demersum
CDE08G0008 Ceratophyllum demersum
Cfa006235 Carpinus fangiana
Cfa026615 Carpinus fangiana
Ciclev10004486m.g Citrus clementina
CiPaw.07G085600 Carya illinoinensis
ClCG10G004080 Citrullus lanatus
COL.COLO4_36603 Corchorus olitorius
COL.COLO4_36604 Corchorus olitorius
Cpa.g.c34134 Carica papaya
Cpa.g.c42961 Carica papaya
Cpa.g.sc2180.1 Carica papaya
Cpa.g.sc4092.1 Carica papaya
Cre12.g525500 Chlamydomonas reinhardtii
CsaV3_3G003930 Cucumis sativus L.
CSS0010526 Camellia sinensis var. sinensis
CSS0033222 Camellia sinensis var. sinensis
CSS0048819 Camellia sinensis var. sinensis
Dinv15379 Davidia involucrata
Duzib128G0478 Durio zibethinus
ECA238G2964 Erigeron canadensis
EL10Ac4g10018 Beta vulgaris
Eucgr.B01438 Eucalyptus grandis
FAN02G1711 Fragaria x ananassa
FAN09G1831 Fragaria x ananassa
FvH4_6g00120 Fragaria vesca
Glyma.03G090100 Glycine max
Glyma.14G155800 Glycine max
Glyma.16G082900 Glycine max
Glyma.20G051200 Glycine max
Gohir.A01G108100 Gossypium hirsutum
Gohir.D01G094500 Gossypium hirsutum
Gorai.002G119900 Gossypium raimondii
GSVIVG01032444001 Vitis vinifera
HanXRQChr03g0062021 Helianthus annuus
HanXRQChr03g0062031 Helianthus annuus
HanXRQChr14g0433021 Helianthus annuus
Haze_04595 Corylus avellana
HPP92_018347 Vanilla planifolia
HPP92_018381 Vanilla planifolia
Hund03857 Selenicereus undatus
Hund07372 Selenicereus undatus
Lalb_Chr03g0041081 Lupinus albus
Lj1g0009175 Lotus japonicus
Lj4A702T41 Lonicera japonica
Lsat_1_v5_gn_0_22860 Lactuca sativa
Lsat_1_v5_gn_1_124700 Lactuca sativa
Lsat_1_v5_gn_2_27601 Lactuca sativa
Lsat_1_v5_gn_3_76880 Lactuca sativa
Lsat_1_v5_gn_4_10921 Lactuca sativa
Lsat_1_v5_gn_8_121940 Lactuca sativa
Manes.13G001400 Manihot esculenta
Mapoly0036s0123 Marchantia polymorpha
MBI18_g11247_MAGBIO Magnolia biondii
MBI18_g24480_MAGBIO Magnolia biondii
MCO10G199 Micromonas commoda
MD14G1089300 Malus domestica
Medtr8g011450 Medicago truncatula
MELO3C014078.2 Cucumis melo
Migut.F01835 Erythranthe guttata
Migut.F01836 Erythranthe guttata
MSTRG.8186 Avicennia marina
Nitab4.5_0000842g0030 Nicotiana tabacum
Nitab4.5_0001308g0170 Nicotiana tabacum
Nitab4.5_0002233g0090 Nicotiana tabacum
Nn1g09878 Nelumbo nucifera
Oeu062030.2 Olea europaea
Os04g0501700 Oryza sativa ssp. japonica
Peaxi162Scf00253g00621 Petunia axillaris
PGR119G1162 Punica granatum
PGSC0003DMG400019714 Solanum tuberosum
Phvul.010G031700 Phaseolus vulgaris
Potri.010G180700 Populus trichocarpa
Pp3c13_20560 Physcomitrium patens
Pp3c13_20568 Physcomitrium patens
Pp3c23_1190 Physcomitrium patens
Pp3c8_20000 Physcomitrium patens
PRCOL_00000469 Prasinoderma coloniale
Prupe.7G036600 Prunus persica
Psat4g206560 Pisum sativum
PSO210G3440 Papaver somniferum
PSO832G1645 Papaver somniferum
QL06p038744 Quercus lobata
QL08p044788 Quercus lobata
QL12p034193 Quercus lobata
RcHm_v2.0_Chr3g0447481 Rosa chinensis
RcHm_v2.0_Chr4g0425031 Rosa chinensis
RcHm_v2.0_Chr5g0069521 Rosa chinensis
Rhsim05G0167600 Rhododendron simsii
SalBow6G5693 Salvia bowleyana
Sc16g0010610 Simmondsia chinensis
Sed0024795 Sechium edule
SEGI_28464 Sequoiadendron giganteum
SEGI_29727 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33218 Striga asiatica
SHI07636 Sapria himalayana
SMO361G0655 Selaginella moellendorffii
Solyc02g081460.4 Solanum lycopersicum
Sopen02g026100 Solanum pennellii
Sp6g26810 Schrenkiella parvula
TAR362G0022 Trochodendron aralioides
TAR375G0465 Trochodendron aralioides
TAR381G0362 Trochodendron aralioides
THA.LOC104820850 Tarenaya hassleriana
Thecc.05G188600 Theobroma cacao
Thhalv10012868m.g Eutrema salsugineum
TPR.G28978 Trifolium pratense
TWI36G0321 Tripterygium wilfordii
unitig_22.g6621 Utricularia gibba
vmacro11193 Vaccinium macrocarpon
VMungo0331G1409 Vigna mungo
Zm00001eb425980 Zea mays

User provided reference genes

Program Settings