Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44750 Brassica napus
Aa31LG4G14880 Aethionema arabicum
Actinidia29969 Actinidia chinensis
Actinidia31880 Actinidia chinensis
Actinidia38513 Actinidia chinensis
Ah.09g230120 Amaranthus hybridus
Ah.14g083630 Amaranthus hybridus
AL3G43930 Arabidopsis lyrata
AL7G44130 Arabidopsis lyrata
Aqoxy7G02679 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea
AT5G35320 Arabidopsis thaliana
ATR0626G171 Amborella trichopoda
Atru.chr12.2077 Acer truncatum
Atru.chr7.2685 Acer truncatum
AUR62021338 Chenopodium quinoa
AUR62033253 Chenopodium quinoa
BcaB08g34509 Brassica carinata
BcaC01g03146 Brassica carinata
BolC3t17837H Brassica oleracea
BraA03t13610Z Brassica rapa
C03p55600 Brassica napus
CANSAT80G2033 Cannabis sativa
CARHR103910 Cardamine hirsuta
CARHR217350 Cardamine hirsuta
Carub.0003s2733 Capsella rubella
Carub.0007s3114 Capsella rubella
Ca_17410_v3 Cicer arietinum L.
Cc00_g16170 Coffea canephora
Cc10_g11560 Coffea canephora
CDE02G3184 Ceratophyllum demersum
CDE02G3603 Ceratophyllum demersum
Ciclev10012648m.g Citrus clementina
CiPaw.15G154600 Carya illinoinensis
CiPaw.16G103000 Carya illinoinensis
ClCG06G014000 Citrullus lanatus
Cpa.g.sc115.44 Carica papaya
CsaV3_1G032220 Cucumis sativus L.
CSS0043250 Camellia sinensis var. sinensis
DCAR_019825 Daucus carota
Dinv02618 Davidia involucrata
Duzib168G0721 Durio zibethinus
Duzib168G1013 Durio zibethinus
Duzib170G0058 Durio zibethinus
ECA234G2314 Erigeron canadensis
ECA240G1118 Erigeron canadensis
EL10Ac8g18324 Beta vulgaris
Eucgr.C02188 Eucalyptus grandis
FAN07G0684 Fragaria x ananassa
FAN12G4058 Fragaria x ananassa
FAN17G0390 Fragaria x ananassa
FAN22G0520 Fragaria x ananassa
FvH4_4g06450 Fragaria vesca
Glyma.05G221800 Glycine max
Glyma.08G028300 Glycine max
Gohir.A05G408500 Gossypium hirsutum
Gohir.D04G006900 Gossypium hirsutum
Gorai.012G008600 Gossypium raimondii
GSVIVG01035163001 Vitis vinifera
HanXRQChr03g0067191 Helianthus annuus
HanXRQChr10g0303491 Helianthus annuus
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla
HPP92_017096 Vanilla planifolia
HPP92_017106 Vanilla planifolia
HPP92_018333 Vanilla planifolia
Hund09052 Selenicereus undatus
Hund26317 Selenicereus undatus
Lalb_Chr05g0223691 Lupinus albus
Lalb_Chr11g0064261 Lupinus albus
Lj4g0023825 Lotus japonicus
Lsat_1_v5_gn_7_59220 Lactuca sativa
Manes.15G189400 Manihot esculenta
MBI13_g31561_MAGBIO Magnolia biondii
MBI16_g18201_MAGBIO Magnolia biondii
MD08G1124200 Malus domestica
MD13G1236100 Malus domestica
MD15G1102900 Malus domestica
MD16G1241100 Malus domestica
Medtr8g101480 Medicago truncatula
MELO3C017390.2 Cucumis melo
Migut.L01903 Erythranthe guttata
MSTRG.10457 Avicennia marina
MSTRG.26528 Avicennia marina
Nitab4.5_0000053g0180 Nicotiana tabacum
Nitab4.5_0000833g0060 Nicotiana tabacum
Nitab4.5_0010835g0010 Nicotiana tabacum
Nitab4.5_0011475g0010 Nicotiana tabacum
Nn8g41070 Nelumbo nucifera
Oeu008926.1 Olea europaea
Oeu044689.1 Olea europaea
Os02g0141500 Oryza sativa ssp. japonica
Peaxi162Scf00020g00002 Petunia axillaris
Peaxi162Scf00075g00074 Petunia axillaris
Peaxi162Scf00083g00112 Petunia axillaris
Peaxi162Scf00228g00099 Petunia axillaris
Peaxi162Scf00315g00813 Petunia axillaris
Peaxi162Scf00451g00717 Petunia axillaris
Peaxi162Scf00460g00005 Petunia axillaris
Peaxi162Scf00543g00012 Petunia axillaris
Peaxi162Scf00566g00025 Petunia axillaris
Peaxi162Scf00740g00003 Petunia axillaris
Peaxi162Scf00889g00221 Petunia axillaris
Peaxi162Scf01260g00001 Petunia axillaris
Peaxi162Scf47975g00003 Petunia axillaris
PGR044G2548 Punica granatum
PGSC0003DMG400013692 Solanum tuberosum
Phvul.002G303500 Phaseolus vulgaris
Potri.006G070900 Populus trichocarpa
Potri.018G132600 Populus trichocarpa
Prupe.1G067800 Prunus persica
Prupe.1G455900 Prunus persica
Psat7g022000 Pisum sativum
PSO063G3463 Papaver somniferum
PSO170G2950 Papaver somniferum
QL11p009451 Quercus lobata
QL12p025899 Quercus lobata
RcHm_v2.0_Chr4g0398241 Rosa chinensis
RcHm_v2.0_Chr6g0305451 Rosa chinensis
Rhsim01G0113200 Rhododendron simsii
Sabra06G0052800 Salix brachista
Sabra18G0112300 Salix brachista
SalBow6G6882 Salvia bowleyana
Sc08g0004640 Simmondsia chinensis
Sed0020945 Sechium edule
Sed0028150 Sechium edule
SGA_v2.0_scaffold63G21842 Striga asiatica
SHI03105 Sapria himalayana
Solyc05g046310.3 Solanum lycopersicum
Sopen00g006190 Solanum pennellii
Sp3g25120 Schrenkiella parvula
TAR383G1035 Trochodendron aralioides
TAR625G0352 Trochodendron aralioides
THA.LOC104808906 Tarenaya hassleriana
THA.LOC104815319 Tarenaya hassleriana
THA.LOC104826579 Tarenaya hassleriana
Thecc.09G002900 Theobroma cacao
Thecc.09G189400 Theobroma cacao
Thhalv10003466m.g Eutrema salsugineum
Thhalv10009663m.g Eutrema salsugineum
TPR.G25464 Trifolium pratense
TWI32G0620 Tripterygium wilfordii
unitig_899.g15188 Utricularia gibba
vmacro20793 Vaccinium macrocarpon
VMungo0251G2709 Vigna mungo
Zm00001eb208100 Zea mays

User provided reference genes

Program Settings