Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33620 Brassica napus
A05p43000 Brassica napus
Aa31LG5G14920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis
Actinidia39994 Actinidia chinensis
AL3G14430 Arabidopsis lyrata
Aqoxy5G00195 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea
AT3G04480 Arabidopsis thaliana
ATR0736G030 Amborella trichopoda
Atru.chr2.993 Acer truncatum
Atru.chr2.994 Acer truncatum
AUR62010111 Chenopodium quinoa
AUR62013106 Chenopodium quinoa
BcaB04g19332 Brassica carinata
BcaC01g04375 Brassica carinata
BcaC05g29939 Brassica carinata
BcaC05g29940 Brassica carinata
BcaC05g30195 Brassica carinata
BcaC05g30222 Brassica carinata
BolC3t16351H Brassica oleracea
BolC5t31675H Brassica oleracea
BolC5t34930H Brassica oleracea
BraA03t12537Z Brassica rapa
BraA05t23044Z Brassica rapa
C03p40820 Brassica napus
C05p29450 Brassica napus
C05p62770 Brassica napus
C08p13010 Brassica napus
CAN.G786.40 Capsicum annuum
CANSAT54G1999 Cannabis sativa
CARHR078630 Cardamine hirsuta
Carub.0003s0364 Capsella rubella
Ca_08303_v3 Cicer arietinum L.
CBR_g3613 Chara braunii
Cc02_g08770 Coffea canephora
Cc02_g08780 Coffea canephora
CDE07G0212 Ceratophyllum demersum
Cfa006359 Carpinus fangiana
Cfa026934 Carpinus fangiana
Ciclev10019185m.g Citrus clementina
CiPaw.07G073200 Carya illinoinensis
ClCG11G010550 Citrullus lanatus
COL.COLO4_15493 Corchorus olitorius
Cpa.g.sc306.8 Carica papaya
Cre01.g033091 Chlamydomonas reinhardtii
CsaV3_2G009810 Cucumis sativus L.
CSS0009313 Camellia sinensis var. sinensis
CSS0021399 Camellia sinensis var. sinensis
CSS0033596 Camellia sinensis var. sinensis
CSS0037989 Camellia sinensis var. sinensis
DCAR_003547 Daucus carota
Dinv35947 Davidia involucrata
Duzib106G1915 Durio zibethinus
Duzib177G0384 Durio zibethinus
ECA238G3062 Erigeron canadensis
EL10Ac5g11645 Beta vulgaris
EL10Ac9g21459 Beta vulgaris
Eucgr.B02151 Eucalyptus grandis
Eucgr.B02424 Eucalyptus grandis
FAN05G0362 Fragaria x ananassa
FAN05G3182 Fragaria x ananassa
FAN05G3606 Fragaria x ananassa
FAN09G0372 Fragaria x ananassa
FAN14G2113 Fragaria x ananassa
FAN14G3018 Fragaria x ananassa
FvH4_6g01810 Fragaria vesca
Glyma.19G115700 Glycine max
Gohir.A11G246900 Gossypium hirsutum
Gohir.D11G257100 Gossypium hirsutum
Gorai.007G275500 Gossypium raimondii
GSVIVG01023486001 Vitis vinifera
HanXRQChr14g0454211 Helianthus annuus
Haze_04419 Corylus avellana
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla
HPP92_014753 Vanilla planifolia
Hund05190 Selenicereus undatus
Hund06905 Selenicereus undatus
Lalb_Chr22g0358841 Lupinus albus
Lalb_Chr22g0358851 Lupinus albus
Lj1g0022218 Lotus japonicus
Lj2A44T74 Lonicera japonica
Lsat_1_v5_gn_2_108321 Lactuca sativa
Manes.08G139800 Manihot esculenta
Mapoly0027s0145 Marchantia polymorpha
MBI10_g13801_MAGBIO Magnolia biondii
MCO10G045 Micromonas commoda
MD04G1230700 Malus domestica
Medtr7g086410 Medicago truncatula
Medtr7g111650 Medicago truncatula
MELO3C008703.2 Cucumis melo
Migut.F00798 Erythranthe guttata
MSTRG.27374 Avicennia marina
Nitab4.5_0003780g0090 Nicotiana tabacum
Nitab4.5_0006737g0070 Nicotiana tabacum
Nn1g02888 Nelumbo nucifera
Oeu006006.2 Olea europaea
Oeu041238.1 Olea europaea
Os02g0810450 Oryza sativa ssp. japonica
Peaxi162Scf00528g00225 Petunia axillaris
PGR142G0621 Punica granatum
PGSC0003DMG400011494 Solanum tuberosum
PGSC0003DMG400019115 Solanum tuberosum
PGSC0003DMG400019116 Solanum tuberosum
Phvul.001G114900 Phaseolus vulgaris
Potri.013G047400 Populus trichocarpa
Potri.019G019600 Populus trichocarpa
Pp3c11_830 Physcomitrium patens
PRCOL_00005667 Prasinoderma coloniale
Prupe.6G350500 Prunus persica
Psat3g087440 Pisum sativum
PSO210G4243 Papaver somniferum
PSO832G3809 Papaver somniferum
QL07p018541 Quercus lobata
QL07p018546 Quercus lobata
RcHm_v2.0_Chr3g0449521 Rosa chinensis
Rhsim05G0172000 Rhododendron simsii
Sabra13G0043400 Salix brachista
Sabra19G0032000 Salix brachista
SalBow3G3009 Salvia bowleyana
Sc20g0000660 Simmondsia chinensis
Sed0014730 Sechium edule
SEGI_01626 Sequoiadendron giganteum
SEGI_03702 Sequoiadendron giganteum
SEGI_09343 Sequoiadendron giganteum
SEGI_18706 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00651 Striga asiatica
SHI22754 Sapria himalayana
SMO348G0068 Selaginella moellendorffii
Solyc04g010080.3 Solanum lycopersicum
Sopen04g005220 Solanum pennellii
Sp3g03330 Schrenkiella parvula
TAR362G0145 Trochodendron aralioides
THA.LOC104827285 Tarenaya hassleriana
Thecc.05G270400 Theobroma cacao
Thhalv10020155m.g Eutrema salsugineum
TPR.G4698 Trifolium pratense
TWI36G1092 Tripterygium wilfordii
unitig_748.g6990 Utricularia gibba
vmacro19987 Vaccinium macrocarpon
VMungo1383G1518 Vigna mungo
Zm00001eb258450 Zea mays

User provided reference genes

Program Settings