Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12060 Brassica napus
Aa31LG7G9750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis
Actinidia08085 Actinidia chinensis
Actinidia30670 Actinidia chinensis
Actinidia30671 Actinidia chinensis
Ah.03g133860 Amaranthus hybridus
AL1G40580 Arabidopsis lyrata
AL6G39900 Arabidopsis lyrata
Aqoxy3G01457 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea
AT1G24340 Arabidopsis thaliana
ATR0824G188 Amborella trichopoda
Atru.chr11.2251 Acer truncatum
Atru.chr11.2253 Acer truncatum
Atru.chr11.2265 Acer truncatum
Atru.chr11.2270 Acer truncatum
Atru.chr12.1465 Acer truncatum
AUR62005575 Chenopodium quinoa
AUR62024155 Chenopodium quinoa
BcaC06g35258 Brassica carinata
BolC7t42310H Brassica oleracea
BraA07t28994Z Brassica rapa
C07p18000 Brassica napus
CAN.G2246.1 Capsicum annuum
CAN.G27.28 Capsicum annuum
CAN.G585.6 Capsicum annuum
CANSAT01G2132 Cannabis sativa
CARHR026760 Cardamine hirsuta
Carub.0001s2573 Capsella rubella
Carub.0007s3241 Capsella rubella
Ca_16480_v3 Cicer arietinum L.
Cc11_g16630 Coffea canephora
CDE02G1220 Ceratophyllum demersum
Cfa009316 Carpinus fangiana
Cfa025560 Carpinus fangiana
Cfa026038 Carpinus fangiana
Ciclev10030830m.g Citrus clementina
CiPaw.05G114700 Carya illinoinensis
CiPaw.05G114800 Carya illinoinensis
ClCG06G008480 Citrullus lanatus
COL.COLO4_15613 Corchorus olitorius
COL.COLO4_23627 Corchorus olitorius
Cpa.g.sc27.216 Carica papaya
Cre14.g630895 Chlamydomonas reinhardtii
CsaV3_5G015350 Cucumis sativus L.
CSS0028948 Camellia sinensis var. sinensis
DCAR_024086 Daucus carota
Dinv14804 Davidia involucrata
Duzib251G0605 Durio zibethinus
ECA233G3670 Erigeron canadensis
EL10Ac6g13442 Beta vulgaris
Eucgr.H04663 Eucalyptus grandis
FAN07G0914 Fragaria x ananassa
FAN12G0151 Fragaria x ananassa
FvH4_4g24220 Fragaria vesca
Glyma.11G248400 Glycine max
Glyma.18G008800 Glycine max
Gohir.A03G128400 Gossypium hirsutum
Gohir.D02G152200 Gossypium hirsutum
Gorai.005G171200 Gossypium raimondii
GSVIVG01010340001 Vitis vinifera
HanXRQChr08g0233581 Helianthus annuus
Haze_02705 Corylus avellana
Haze_12371 Corylus avellana
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla
HPP92_001243 Vanilla planifolia
HPP92_001244 Vanilla planifolia
HPP92_001258 Vanilla planifolia
HPP92_001259 Vanilla planifolia
Hund25442 Selenicereus undatus
Lalb_Chr23g0277981 Lupinus albus
Lj3A1065G86 Lonicera japonica
Lj3g0026022 Lotus japonicus
Lsat_1_v5_gn_8_149841 Lactuca sativa
Manes.13G016100 Manihot esculenta
Mapoly0042s0063 Marchantia polymorpha
MBI05_g16127_MAGBIO Magnolia biondii
MBI07_g43659_MAGBIO Magnolia biondii
MBI08_g36442_MAGBIO Magnolia biondii
MBI13_g10206_MAGBIO Magnolia biondii
MBI16_g25874_MAGBIO Magnolia biondii
MBI18_g03939_MAGBIO Magnolia biondii
MBI18_g03943_MAGBIO Magnolia biondii
MBI18_g06981_MAGBIO Magnolia biondii
MBI18_g19470_MAGBIO Magnolia biondii
MBI18_g33166_MAGBIO Magnolia biondii
MBI18_g47010_MAGBIO Magnolia biondii
MCO06G130 Micromonas commoda
MD13G1113200 Malus domestica
MD16G1112100 Malus domestica
MD16G1112300 Malus domestica
MD16G1112400 Malus domestica
Medtr3g085660 Medicago truncatula
MELO3C018283.2 Cucumis melo
Migut.K00700 Erythranthe guttata
Nitab4.5_0000537g0120 Nicotiana tabacum
Nitab4.5_0001802g0060 Nicotiana tabacum
Nitab4.5_0002129g0120 Nicotiana tabacum
Nn4g22400 Nelumbo nucifera
Oeu056679.1 Olea europaea
Os01g0901700 Oryza sativa ssp. japonica
Peaxi162Scf00634g00011 Petunia axillaris
Peaxi162Scf00804g00120 Petunia axillaris
PGR119G0347 Punica granatum
PGSC0003DMG400021087 Solanum tuberosum
PGSC0003DMG400022618 Solanum tuberosum
Phvul.001G259800 Phaseolus vulgaris
Potri.008G178400 Populus trichocarpa
Pp3c26_6380 Physcomitrium patens
PRCOL_00001291 Prasinoderma coloniale
Prupe.1G232900 Prunus persica
Psat5g094520 Pisum sativum
PSO063G5600 Papaver somniferum
PSO782G5362 Papaver somniferum
QL03p054705 Quercus lobata
RcHm_v2.0_Chr4g0431061 Rosa chinensis
Rhsim12G0029800 Rhododendron simsii
Sabra08G0136200 Salix brachista
Sabra10G0048500 Salix brachista
SalBow1G4350 Salvia bowleyana
SalBow1G5463 Salvia bowleyana
Sc11g0000650 Simmondsia chinensis
Sed0000829 Sechium edule
SEGI_08672 Sequoiadendron giganteum
SEGI_28928 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07137 Striga asiatica
SHI17941 Sapria himalayana
SMO356G0356 Selaginella moellendorffii
Solyc04g150134.1 Solanum lycopersicum
Solyc05g006810.4 Solanum lycopersicum
Sopen05g002750 Solanum pennellii
Sp1g23430 Schrenkiella parvula
TAR374G0458 Trochodendron aralioides
THA.LOC104799053 Tarenaya hassleriana
Thecc.02G274600 Theobroma cacao
Thhalv10006951m.g Eutrema salsugineum
TPR.G22444 Trifolium pratense
TPR.G492 Trifolium pratense
TPR.G9414 Trifolium pratense
TWI18G0401 Tripterygium wilfordii
unitig_747.g21130 Utricularia gibba
vmacro01083 Vaccinium macrocarpon
VMungo1383G1024 Vigna mungo
Zm00001eb014870 Zea mays

User provided reference genes

Program Settings