Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01460 Brassica napus
A03p05510 Brassica napus
Aa31LG3G14940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.924 Anthoceros agrestis
Actinidia27132 Actinidia chinensis
Actinidia29952 Actinidia chinensis
Actinidia38495 Actinidia chinensis
Ah.04g159570 Amaranthus hybridus
AL340U10010 Arabidopsis lyrata
AL6G23090 Arabidopsis lyrata
Aqoxy279s001 Aquilegia oxysepala
Aqoxy2G00052 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2SU3A5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCWF2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ELE64U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4LM1Q Arachis hypogaea
AT5G12290 Arabidopsis thaliana
ATR0307G105 Amborella trichopoda
Atru.chr3.2833 Acer truncatum
AUR62000232 Chenopodium quinoa
AUR62006578 Chenopodium quinoa
BcaB01g05412 Brassica carinata
BolC2t06512H Brassica oleracea
BolC3t13149H Brassica oleracea
BraA02t05125Z Brassica rapa
BraA03t09889Z Brassica rapa
C02p05680 Brassica napus
C03p06430 Brassica napus
C03p06490 Brassica napus
CAN.G651.4 Capsicum annuum
CANSAT54G0197 Cannabis sativa
CARHR200820 Cardamine hirsuta
Carub.0006s1080 Capsella rubella
Ca_06178_v3 Cicer arietinum L.
CBR_g51661 Chara braunii
Cc01_g07180 Coffea canephora
CDE07G0611 Ceratophyllum demersum
Cfa010164 Carpinus fangiana
Cfa026272 Carpinus fangiana
Ciclev10014694m.g Citrus clementina
CiPaw.14G108200 Carya illinoinensis
CiPaw.14G108700 Carya illinoinensis
ClCG02G022550 Citrullus lanatus
COL.COLO4_33262 Corchorus olitorius
Cpa.g.sc34.205 Carica papaya
Cre14.g610351 Chlamydomonas reinhardtii
CsaV3_6G038680 Cucumis sativus L.
CSS0024863 Camellia sinensis var. sinensis
CSS0034993 Camellia sinensis var. sinensis
DCAR_023860 Daucus carota
Dinv24604 Davidia involucrata
Duzib168G1271 Durio zibethinus
Duzib170G0952 Durio zibethinus
ECA233G4564 Erigeron canadensis
ECA233G6112 Erigeron canadensis
ECA238G1118 Erigeron canadensis
ECA248G3958 Erigeron canadensis
EL10Ac4g10071 Beta vulgaris
Eucgr.B03761 Eucalyptus grandis
FAN04G1678 Fragaria x ananassa
FAN08G0571 Fragaria x ananassa
FAN13G0840 Fragaria x ananassa
FAN18G1184 Fragaria x ananassa
FvH4_5g07960 Fragaria vesca
Glyma.02G277200 Glycine max
Glyma.09G128251 Glycine max
Glyma.14G037400 Glycine max
Glyma.14G038000 Glycine max
Gohir.A08G009400 Gossypium hirsutum
Gohir.D08G019500 Gossypium hirsutum
Gorai.004G014000 Gossypium raimondii
GSVIVG01037391001 Vitis vinifera
HanXRQChr05g0144311 Helianthus annuus
HanXRQChr06g0181891 Helianthus annuus
Haze_23549 Corylus avellana
Hma1.2p1_1843F.1_g305080 Hydrangea macrophylla
Hma1.2p1_2592F.1_g325060 Hydrangea macrophylla
Hma1.2p1_2592F.1_g325070 Hydrangea macrophylla
HPP92_015601 Vanilla planifolia
Hund05322 Selenicereus undatus
Hund21956 Selenicereus undatus
Lalb_Chr10g0106071 Lupinus albus
Lj1A297G59 Lonicera japonica
Lj1C290G6 Lonicera japonica
Lj1C297T8 Lonicera japonica
LjContig00564g0010958 Lotus japonicus
Lsat_1_v5_gn_2_36161 Lactuca sativa
Lsat_1_v5_gn_4_56401 Lactuca sativa
Lsat_1_v5_gn_4_59101 Lactuca sativa
Lsat_1_v5_gn_5_119240 Lactuca sativa
Lsat_1_v5_gn_8_119321 Lactuca sativa
Manes.02G135100 Manihot esculenta
Mapoly0034s0093 Marchantia polymorpha
MBI13_g20755_MAGBIO Magnolia biondii
MCO07G292 Micromonas commoda
MD03G1163400 Malus domestica
Medtr5g088780 Medicago truncatula
MELO3C014531.2 Cucumis melo
Migut.N02404 Erythranthe guttata
MSTRG.12421 Avicennia marina
Nitab4.5_0000428g0060 Nicotiana tabacum
Nitab4.5_0002300g0060 Nicotiana tabacum
Nn001s41348 Nelumbo nucifera
Nn1g07055 Nelumbo nucifera
Nn7g36972 Nelumbo nucifera
Oeu032047.1 Olea europaea
Oeu032057.1 Olea europaea
Oeu032059.1 Olea europaea
Os03g0356470 Oryza sativa ssp. japonica
Os03g0377300 Oryza sativa ssp. japonica
Os03g0377500 Oryza sativa ssp. japonica
Peaxi162Scf00050g02225 Petunia axillaris
PGR102G1516 Punica granatum
PGSC0003DMG403022702 Solanum tuberosum
Phvul.008G203700 Phaseolus vulgaris
Potri.009G022200 Populus trichocarpa
Pp3c22_1870 Physcomitrium patens
Pp3c3_6740 Physcomitrium patens
Prupe.4G269200 Prunus persica
Psat0s680g0080 Pisum sativum
PSO541G4749 Papaver somniferum
PSO675G4775 Papaver somniferum
QL01p016041 Quercus lobata
RcHm_v2.0_Chr7g0190441 Rosa chinensis
SalBow3G4478 Salvia bowleyana
Sc06g0004780 Simmondsia chinensis
Sed0004908 Sechium edule
SEGI_25760 Sequoiadendron giganteum
SEGI_30846 Sequoiadendron giganteum
SEGI_31829 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07591 Striga asiatica
SMO147G0386 Selaginella moellendorffii
Solyc01g009030.4 Solanum lycopersicum
Sopen01g004520 Solanum pennellii
Sp6g31350 Schrenkiella parvula
TAR623G1264 Trochodendron aralioides
THA.LOC104799144 Tarenaya hassleriana
Thecc.09G251600 Theobroma cacao
Thhalv10013024m.g Eutrema salsugineum
TPR.G16394 Trifolium pratense
TWI79G0414 Tripterygium wilfordii
unitig_27.g25017 Utricularia gibba
vmacro14280 Vaccinium macrocarpon
VMungo1127G1498 Vigna mungo
VMungo1215G1729 Vigna mungo
VMungo1245G0001 Vigna mungo
Zm00001eb017230 Zea mays

User provided reference genes

Program Settings