Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04490 Brassica napus
Aa31LG10G5350 Aethionema arabicum
Actinidia06302 Actinidia chinensis
Actinidia17702 Actinidia chinensis
AL1G55050 Arabidopsis lyrata
Aqoxy3G01487 Aquilegia oxysepala
Aqoxy3G04132 Aquilegia oxysepala
Aqoxy3G04133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ESBK1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZJN9EZ Arachis hypogaea
AT1G48420 Arabidopsis thaliana
ATR0598G263 Amborella trichopoda
Atru.chr9.1568 Acer truncatum
AUR62038575 Chenopodium quinoa
AUR62042043 Chenopodium quinoa
BcaB07g33760 Brassica carinata
BcaC05g27571 Brassica carinata
BcaC08g43037 Brassica carinata
BolC5t32266H Brassica oleracea
BolC6t35420H Brassica oleracea
BraA06t23653Z Brassica rapa
C05p35540 Brassica napus
C06p02970 Brassica napus
CAN.G637.11 Capsicum annuum
CANSAT80G1805 Cannabis sativa
CARHR038040 Cardamine hirsuta
Carub.0001s3754 Capsella rubella
Ca_17169_v3 Cicer arietinum L.
Cc04_g09040 Coffea canephora
CDE05G0597 Ceratophyllum demersum
CDE11G0073 Ceratophyllum demersum
Cfa020677 Carpinus fangiana
Cfa024692 Carpinus fangiana
Cfa025391 Carpinus fangiana
Ciclev10024301m.g Citrus clementina
CiPaw.02G181900 Carya illinoinensis
CiPaw.16G099900 Carya illinoinensis
CiPaw.16G100100 Carya illinoinensis
COL.COLO4_33012 Corchorus olitorius
Cpa.g.sc7.143 Carica papaya
Cre07.g319320 Chlamydomonas reinhardtii
Cre07.g319400 Chlamydomonas reinhardtii
CsaV3_1G005050 Cucumis sativus L.
CSS0029252 Camellia sinensis var. sinensis
CSS0042250 Camellia sinensis var. sinensis
DCAR_013703 Daucus carota
Dinv06025 Davidia involucrata
Dinv17781 Davidia involucrata
Duzib068G1262 Durio zibethinus
ECA232G0859 Erigeron canadensis
EL10Ac8g19579 Beta vulgaris
Eucgr.H00596 Eucalyptus grandis
FAN04G0665 Fragaria x ananassa
FAN08G1527 Fragaria x ananassa
FAN13G1354 Fragaria x ananassa
FAN18G3456 Fragaria x ananassa
FvH4_5g18020 Fragaria vesca
FvH4_5g18030 Fragaria vesca
Glyma.05G248600 Glycine max
Glyma.08G057251 Glycine max
Gohir.A11G001600 Gossypium hirsutum
Gohir.D06G220200 Gossypium hirsutum
Gohir.D11G001200 Gossypium hirsutum
Gorai.007G002100 Gossypium raimondii
GSVIVG01000389001 Vitis vinifera
GSVIVG01012590001 Vitis vinifera
HanXRQChr16g0503311 Helianthus annuus
Haze_18981 Corylus avellana
Hma1.2p1_0493F.1_g165090 Hydrangea macrophylla
HPP92_009318 Vanilla planifolia
Hund22332 Selenicereus undatus
Hund22334 Selenicereus undatus
Hund22342 Selenicereus undatus
Hund29997 Selenicereus undatus
Hund29998 Selenicereus undatus
Lalb_Chr09g0330201 Lupinus albus
Lj5C165T19 Lonicera japonica
LjContig00484g0022264 Lotus japonicus
Lsat_1_v5_gn_0_10481 Lactuca sativa
Manes.06G000700 Manihot esculenta
Mapoly0080s0004 Marchantia polymorpha
MBI19_g02947_MAGBIO Magnolia biondii
MBI19_g46696_MAGBIO Magnolia biondii
MCO03G464 Micromonas commoda
MD06G1235700 Malus domestica
MD06G1235800 Malus domestica
MD14G1242800 Malus domestica
Medtr8g107670 Medicago truncatula
MELO3C001942.2 Cucumis melo
Migut.O00239 Erythranthe guttata
MSTRG.23199 Avicennia marina
Nitab4.5_0000936g0010 Nicotiana tabacum
Nitab4.5_0001180g0110 Nicotiana tabacum
Nitab4.5_0003066g0040 Nicotiana tabacum
Nn4g24682 Nelumbo nucifera
Oeu038408.4 Olea europaea
Os02g0773300 Oryza sativa ssp. japonica
Peaxi162Scf00171g00530 Petunia axillaris
Peaxi162Scf00171g00532 Petunia axillaris
Peaxi162Scf00171g00533 Petunia axillaris
PGR083G1095 Punica granatum
PGSC0003DMG400031041 Solanum tuberosum
Phvul.002G332800 Phaseolus vulgaris
Potri.012G038900 Populus trichocarpa
Pp3c15_20550 Physcomitrium patens
Pp3s30_410 Physcomitrium patens
PRCOL_00002385 Prasinoderma coloniale
PRCOL_00006696 Prasinoderma coloniale
Prupe.5G240500 Prunus persica
Prupe.8G055600 Prunus persica
Psat7g000520 Pisum sativum
PSO063G6091 Papaver somniferum
PSO782G2673 Papaver somniferum
QL10p032921 Quercus lobata
QL10p032932 Quercus lobata
QL10p033020 Quercus lobata
RcHm_v2.0_Chr7g0177581 Rosa chinensis
Rhsim08G0124200 Rhododendron simsii
Sabra12G0027400 Salix brachista
SalBow5G0201 Salvia bowleyana
SalBow5G4817 Salvia bowleyana
Sc24g0002660 Simmondsia chinensis
Sc24g0002670 Simmondsia chinensis
Sed0005435 Sechium edule
Sed0017671 Sechium edule
SEGI_13462 Sequoiadendron giganteum
SEGI_33957 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10767 Striga asiatica
SMO112G0110 Selaginella moellendorffii
SMO364G0181 Selaginella moellendorffii
SMO364G0565 Selaginella moellendorffii
Solyc03g098230.3 Solanum lycopersicum
Sopen03g028930 Solanum pennellii
Sopen03g028940 Solanum pennellii
Sp1g35370 Schrenkiella parvula
TAR622G0642 Trochodendron aralioides
THA.LOC104809825 Tarenaya hassleriana
THA.LOC104820332 Tarenaya hassleriana
Thecc.03G069100 Theobroma cacao
Thhalv10011539m.g Eutrema salsugineum
TPR.G1402 Trifolium pratense
TWI81G0487 Tripterygium wilfordii
TWI81G0721 Tripterygium wilfordii
unitig_750.g28458 Utricularia gibba
vmacro17736 Vaccinium macrocarpon
VMungo0251G2121 Vigna mungo
Zm00001eb256470 Zea mays

User provided reference genes

Program Settings