Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p19790 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.5804 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5276 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1955 Anthoceros agrestis
Actinidia19084 Actinidia chinensis
Actinidia33046 Actinidia chinensis
AL5G27130 Arabidopsis lyrata
Aqoxy3G00903 Aquilegia oxysepala
Aqoxy3G03084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.67M40U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.921FSI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FI7QKA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HW74CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5B2QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LKK6LB Arachis hypogaea
AT3G47833 Arabidopsis thaliana
AT5G62575 Arabidopsis thaliana
ATR1149G117 Amborella trichopoda
Atru.chr9.2417 Acer truncatum
AUR62008276 Chenopodium quinoa
AUR62031035 Chenopodium quinoa
BcaB01g00872 Brassica carinata
BcaB02g10688 Brassica carinata
BcaC01g01772 Brassica carinata
BcaC01g02293 Brassica carinata
BolC3t18969H Brassica oleracea
BolC3t19504H Brassica oleracea
BraA06t25059Z Brassica rapa
C03p66960 Brassica napus
C03p72060 Brassica napus
CANSAT35G0192 Cannabis sativa
CANSAT80G1974 Cannabis sativa
CARHR156530 Cardamine hirsuta
CARHR276360 Cardamine hirsuta
Carub.0005s1395 Capsella rubella
Carub.0008s2325 Capsella rubella
Ca_10512_v3 Cicer arietinum L.
CBR_g34554 Chara braunii
Cc04_g13080 Coffea canephora
CDE10G1084 Ceratophyllum demersum
CDE10G1207 Ceratophyllum demersum
Cfa019078 Carpinus fangiana
Ciclev10024649m.g Citrus clementina
CiPaw.12G023900 Carya illinoinensis
ClCG06G016770 Citrullus lanatus
COL.COLO4_04329 Corchorus olitorius
Cpa.g.c35589.2 Carica papaya
CsaV3_1G001750 Cucumis sativus L.
CSS0001011 Camellia sinensis var. sinensis
CSS0038581 Camellia sinensis var. sinensis
CSS0046931 Camellia sinensis var. sinensis
DCAR_031298 Daucus carota
Dinv09171 Davidia involucrata
Dinv20690 Davidia involucrata
Duzib068G0746 Durio zibethinus
Duzib205G1171 Durio zibethinus
ECA232G1832 Erigeron canadensis
EL10Ac5g10819 Beta vulgaris
Eucgr.B00344 Eucalyptus grandis
FAN04G3047 Fragaria x ananassa
FAN08G0574 Fragaria x ananassa
FAN13G2199 Fragaria x ananassa
FAN18G1077 Fragaria x ananassa
FvH4_5g16500 Fragaria vesca
Glyma.04G179700 Glycine max
Glyma.06G185100 Glycine max
Gohir.A12G276360 Gossypium hirsutum
Gohir.D12G277200 Gossypium hirsutum
Gorai.008G297700 Gossypium raimondii
GSVIVG01007813001 Vitis vinifera
HanXRQChr09g0271731 Helianthus annuus
HanXRQChr16g0503551 Helianthus annuus
Haze_07448 Corylus avellana
Hma1.2p1_0002F.1_g002700 Hydrangea macrophylla
Hma1.2p1_1643F.1_g295260 Hydrangea macrophylla
Hma1.2p1_1643F.1_g295270 Hydrangea macrophylla
Hma1.2p1_2351F.1_g320497 Hydrangea macrophylla
Hma1.2p1_2351F.1_g320498 Hydrangea macrophylla
HPP92_017066 Vanilla planifolia
HPP92_017347 Vanilla planifolia
Hund09411 Selenicereus undatus
Lalb_Chr11g0071141 Lupinus albus
Lalb_Chr23g0273091 Lupinus albus
Lj1g0020478 Lotus japonicus
Lsat_1_v5_gn_4_72681 Lactuca sativa
Manes.06G101600 Manihot esculenta
Manes.06G101800 Manihot esculenta
Manes.14G069501 Manihot esculenta
Mapoly0038s0062 Marchantia polymorpha
MBI02_g26995_MAGBIO Magnolia biondii
MBI15_g16478_MAGBIO Magnolia biondii
MD06G1180200 Malus domestica
MD14G1185300 Malus domestica
Medtr3g078310 Medicago truncatula
MELO3C017115.2 Cucumis melo
Migut.D01788 Erythranthe guttata
MSTRG.4382 Avicennia marina
MSTRG.9667 Avicennia marina
Nitab4.5_0003132g0040 Nicotiana tabacum
Nitab4.5_0005570g0060 Nicotiana tabacum
Nn3g16981 Nelumbo nucifera
Nn4g22889 Nelumbo nucifera
Oeu016348.1 Olea europaea
Oeu022174.1 Olea europaea
Os09g0382500 Oryza sativa ssp. japonica
Peaxi162Scf00375g00418 Petunia axillaris
PGR083G2074 Punica granatum
Phvul.009G149950 Phaseolus vulgaris
Phvul.009G181300 Phaseolus vulgaris
Potri.012G077101 Populus trichocarpa
Potri.015G072100 Populus trichocarpa
Pp3c7_6970 Physcomitrium patens
Prupe.5G178000 Prunus persica
Psat5g113840 Pisum sativum
Psat7g153800 Pisum sativum
Psat7g156680 Pisum sativum
PSO017G3759 Papaver somniferum
PSO063G7000 Papaver somniferum
PSO478G4659 Papaver somniferum
PSO832G4075 Papaver somniferum
QL10p013399 Quercus lobata
RcHm_v2.0_Chr7g0179591 Rosa chinensis
Rhsim12G0162300 Rhododendron simsii
Sabra12G0055200 Salix brachista
SalBow3G2397 Salvia bowleyana
Sc04g0002050 Simmondsia chinensis
Sed0009180 Sechium edule
Sed0013294 Sechium edule
SEGI_14877 Sequoiadendron giganteum
Solyc06g073360.3 Solanum lycopersicum
Sopen06g029740 Solanum pennellii
Sp2g25760 Schrenkiella parvula
TAR371G1219 Trochodendron aralioides
TAR622G0050 Trochodendron aralioides
TAR629G1223 Trochodendron aralioides
THA.LOC104819433 Tarenaya hassleriana
THA.LOC104821444 Tarenaya hassleriana
Thecc.03G005900 Theobroma cacao
Thhalv10005150m.g Eutrema salsugineum
Thhalv10010853m.g Eutrema salsugineum
TPR.G15088 Trifolium pratense
TPR.G17706 Trifolium pratense
TWI32G1183 Tripterygium wilfordii
TWI34G0241 Tripterygium wilfordii
unitig_0.g791 Utricularia gibba
Zm00001eb098990 Zea mays
Zm00001eb311750 Zea mays

User provided reference genes

Program Settings