Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37900 Brassica napus
Aa31LG11G8390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.988 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.307 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.308 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.310 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.311 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2936 Anthoceros agrestis
Actinidia40297 Actinidia chinensis
Ah.00g238040 Amaranthus hybridus
AL8G22670 Arabidopsis lyrata
Aqoxy2G02916 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9CA2Y1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5RJVP Arachis hypogaea
AT5G49150 Arabidopsis thaliana
ATR0580G217 Amborella trichopoda
Atru.chr4.2893 Acer truncatum
AUR62018094 Chenopodium quinoa
AUR62032020 Chenopodium quinoa
BcaC03g17698 Brassica carinata
BcaC03g17701 Brassica carinata
BcaC05g26383 Brassica carinata
BcaC06g30714 Brassica carinata
BolC2t11776H Brassica oleracea
BraA02t08774Z Brassica rapa
C05p24130 Brassica napus
CAN.G1639.1 Capsicum annuum
CANSAT78G0554 Cannabis sativa
CARHR059510 Cardamine hirsuta
CARHR186440 Cardamine hirsuta
CARHR285990 Cardamine hirsuta
CARHR286000 Cardamine hirsuta
CARHR286010 Cardamine hirsuta
CARHR286020 Cardamine hirsuta
Carub.0008s0895 Capsella rubella
Ca_10630_v3 Cicer arietinum L.
Cc03_g01590 Coffea canephora
CDE02G3730 Ceratophyllum demersum
CDE02G3967 Ceratophyllum demersum
Cfa015421 Carpinus fangiana
Ciclev10007186m.g Citrus clementina
CiPaw.02G080300 Carya illinoinensis
COL.COLO4_13828 Corchorus olitorius
Cpa.g.sc50.170 Carica papaya
CSS0043552 Camellia sinensis var. sinensis
DCAR_023295 Daucus carota
Dinv29734 Davidia involucrata
Duzib151G0715 Durio zibethinus
ECA240G4151 Erigeron canadensis
EL10Ac3g06634 Beta vulgaris
Eucgr.H03956 Eucalyptus grandis
FAN07G0695 Fragaria x ananassa
FAN12G2768 Fragaria x ananassa
FAN12G2807 Fragaria x ananassa
FAN17G1646 Fragaria x ananassa
FvH4_4g18570 Fragaria vesca
Glyma.09G042600 Glycine max
Glyma.09G140050 Glycine max
Glyma.15G192400 Glycine max
Gohir.A02G050600 Gossypium hirsutum
Gohir.D02G055533 Gossypium hirsutum
Gohir.D02G055566 Gossypium hirsutum
Gorai.005G061500 Gossypium raimondii
GSVIVG01035118001 Vitis vinifera
HanXRQChr03g0089541 Helianthus annuus
HanXRQChr03g0089551 Helianthus annuus
HanXRQChr03g0089561 Helianthus annuus
Haze_01171 Corylus avellana
Hma1.2p1_0078F.1_g040610 Hydrangea macrophylla
Hma1.2p1_0078F.1_g040620 Hydrangea macrophylla
Hma1.2p1_0139F.1_g063315 Hydrangea macrophylla
Hma1.2p1_0139F.1_g063320 Hydrangea macrophylla
Hma1.2p1_1659F.1_g296120 Hydrangea macrophylla
HPP92_022450 Vanilla planifolia
Hund20526 Selenicereus undatus
Lalb_Chr15g0086021 Lupinus albus
Lalb_Chr15g0086031 Lupinus albus
Lalb_Chr15g0086041 Lupinus albus
Lj6C680G7 Lonicera japonica
Lj6g0024094 Lotus japonicus
Lsat_1_v5_gn_2_33340 Lactuca sativa
Lsat_1_v5_gn_6_96300 Lactuca sativa
Lsat_1_v5_gn_8_152101 Lactuca sativa
Manes.04G040225 Manihot esculenta
Manes.04G045344 Manihot esculenta
Manes.04G046000 Manihot esculenta
Manes.04G046272 Manihot esculenta
Manes.04G046718 Manihot esculenta
Manes.04G046727 Manihot esculenta
Mapoly0125s0023 Marchantia polymorpha
Mapoly0125s0024 Marchantia polymorpha
MBI15_g07480_MAGBIO Magnolia biondii
Medtr2g435850 Medicago truncatula
Medtr2g436170 Medicago truncatula
Medtr5g020160 Medicago truncatula
Migut.G00081 Erythranthe guttata
Migut.G00133 Erythranthe guttata
Nitab4.5_0000695g0020 Nicotiana tabacum
Nitab4.5_0006814g0030 Nicotiana tabacum
Nn3g21533 Nelumbo nucifera
Oeu035688.1 Olea europaea
Os09g0424701 Oryza sativa ssp. japonica
Peaxi162Scf00065g01432 Petunia axillaris
PGR004G1871 Punica granatum
Phvul.009G250200 Phaseolus vulgaris
Potri.007G124900 Populus trichocarpa
Prupe.1G132400 Prunus persica
Psat1g155720 Pisum sativum
PSO170G2573 Papaver somniferum
PSO407G0255 Papaver somniferum
QL06p010168 Quercus lobata
RcHm_v2.0_Chr4g0423171 Rosa chinensis
Rhsim04G0224900 Rhododendron simsii
Sabra07G0100800 Salix brachista
Sabra07G0101000 Salix brachista
SalBow2G1933 Salvia bowleyana
Sc12g0008580 Simmondsia chinensis
Sc13g0003270 Simmondsia chinensis
Sc13g0003280 Simmondsia chinensis
SGA_v2.0_scaffold67G22603 Striga asiatica
SHI26089 Sapria himalayana
SHI26090 Sapria himalayana
SHI26092 Sapria himalayana
SHI26096 Sapria himalayana
SHI27644 Sapria himalayana
SHI34756 Sapria himalayana
SMO109G0005 Selaginella moellendorffii
SMO111G0104 Selaginella moellendorffii
SMO174G0176 Selaginella moellendorffii
SMO347G0277 Selaginella moellendorffii
Solyc01g066510.3 Solanum lycopersicum
Sopen01g028200 Solanum pennellii
Sp2g19500 Schrenkiella parvula
TAR636G0082 Trochodendron aralioides
TAR636G0683 Trochodendron aralioides
THA.LOC104818914 Tarenaya hassleriana
Thecc.04G288100 Theobroma cacao
Thecc.04G288200 Theobroma cacao
Thhalv10005444m.g Eutrema salsugineum
TPR.G14183 Trifolium pratense
TPR.G29612 Trifolium pratense
TPR.G8658 Trifolium pratense
TPR.G9115 Trifolium pratense
TWI09G0094 Tripterygium wilfordii
vmacro08181 Vaccinium macrocarpon
VMungo1309G0850 Vigna mungo
Zm00001eb099800 Zea mays

User provided reference genes

Program Settings