Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p38620 Brassica napus
Aa31LG4G2770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3616 Anthoceros agrestis
Actinidia21819 Actinidia chinensis
AL2G32110 Arabidopsis lyrata
Aqoxy1G00348 Aquilegia oxysepala
Aqoxy1G00349 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JS5XG8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X03KN2 Arachis hypogaea
AT1G72440 Arabidopsis thaliana
ATR0317G028 Amborella trichopoda
Atru.chr1.4129 Acer truncatum
AUR62001432 Chenopodium quinoa
AUR62009935 Chenopodium quinoa
BcaB03g14995 Brassica carinata
BcaB05g24755 Brassica carinata
BcaC08g46695 Brassica carinata
BolC6t39723H Brassica oleracea
BraA07t31420Z Brassica rapa
C06p46800 Brassica napus
CAN.G790.67 Capsicum annuum
CANSAT01G1537 Cannabis sativa
CARHR065370 Cardamine hirsuta
Carub.0002s1929 Capsella rubella
Ca_23422_v3 Cicer arietinum L.
Ca_30848_v3 Cicer arietinum L.
CBR_g4353 Chara braunii
Cc00_g06320 Coffea canephora
Cc04_g00890 Coffea canephora
CDE05G0629 Ceratophyllum demersum
CDE11G0362 Ceratophyllum demersum
CDE11G1047 Ceratophyllum demersum
Cfa003490 Carpinus fangiana
Cfa026526 Carpinus fangiana
Ciclev10024779m.g Citrus clementina
CiPaw.01G213900 Carya illinoinensis
ClCG09G001250 Citrullus lanatus
COL.COLO4_30832 Corchorus olitorius
COL.COLO4_30833 Corchorus olitorius
Cpa.g.sc25.173 Carica papaya
Cre10.g459600 Chlamydomonas reinhardtii
CsaV3_7G034120 Cucumis sativus L.
CSS0009347 Camellia sinensis var. sinensis
CSS0048439 Camellia sinensis var. sinensis
DCAR_026429 Daucus carota
Dinv37834 Davidia involucrata
Dinv37835 Davidia involucrata
ECA233G2064 Erigeron canadensis
ECA234G0903 Erigeron canadensis
ECA234G3781 Erigeron canadensis
EL10Ac7g16459 Beta vulgaris
Eucgr.J02606 Eucalyptus grandis
FAN02G4153 Fragaria x ananassa
FAN05G3041 Fragaria x ananassa
FAN09G4827 Fragaria x ananassa
FAN14G5424 Fragaria x ananassa
FAN23G2170 Fragaria x ananassa
FvH4_6g35460 Fragaria vesca
Glyma.07G043700 Glycine max
Glyma.16G012100 Glycine max
Gohir.A10G051500 Gossypium hirsutum
Gohir.D10G053200 Gossypium hirsutum
Gorai.011G056800 Gossypium raimondii
GSVIVG01016696001 Vitis vinifera
HanXRQChr04g0122031 Helianthus annuus
HanXRQChr12g0360151 Helianthus annuus
Haze_16103 Corylus avellana
Haze_25369 Corylus avellana
HPP92_014041 Vanilla planifolia
Hund18058 Selenicereus undatus
Hund18654 Selenicereus undatus
Lalb_Chr04g0253821 Lupinus albus
Lj3g0023295 Lotus japonicus
Lj5A31T61 Lonicera japonica
Lj5C31T11 Lonicera japonica
Lsat_1_v5_gn_5_136720 Lactuca sativa
Manes.09G018800 Manihot esculenta
Mapoly0001s0039 Marchantia polymorpha
MBI13_g01677_MAGBIO Magnolia biondii
MD09G1175700 Malus domestica
MD17G1151100 Malus domestica
Medtr4g119670 Medicago truncatula
Medtr5g019130 Medicago truncatula
MELO3C024322.2 Cucumis melo
Migut.I01119 Erythranthe guttata
MSTRG.13912 Avicennia marina
MSTRG.22527 Avicennia marina
Nitab4.5_0003981g0040 Nicotiana tabacum
Nitab4.5_0007072g0030 Nicotiana tabacum
Nitab4.5_0009947g0020 Nicotiana tabacum
Nn8g38536 Nelumbo nucifera
Oeu000383.1 Olea europaea
Os09g0116400 Oryza sativa ssp. japonica
Peaxi162Scf00038g02247 Petunia axillaris
Peaxi162Scf00535g00325 Petunia axillaris
PGR004G0779 Punica granatum
PGR102G2847 Punica granatum
PGSC0003DMG400009145 Solanum tuberosum
Phvul.010G125200 Phaseolus vulgaris
Potri.001G164100 Populus trichocarpa
Pp3c8_7540 Physcomitrium patens
Pp3c9_25340 Physcomitrium patens
PRCOL_00007240 Prasinoderma coloniale
Prupe.3G034700 Prunus persica
Psat2g016360 Pisum sativum
Psat4g066440 Pisum sativum
Psat4g198760 Pisum sativum
Psat7g194920 Pisum sativum
Psat7g194960 Pisum sativum
PSO339G5314 Papaver somniferum
PSO384G5027 Papaver somniferum
QL05p001958 Quercus lobata
RcHm_v2.0_Chr2g0147011 Rosa chinensis
Rhsim08G0242500 Rhododendron simsii
Sabra01G0128700 Salix brachista
SalBow6G5915 Salvia bowleyana
Sc12g0010810 Simmondsia chinensis
Sc16g0005100 Simmondsia chinensis
Sc16g0005120 Simmondsia chinensis
Sc16g0005200 Simmondsia chinensis
Sc16g0005210 Simmondsia chinensis
Sed0003275 Sechium edule
Sed0017975 Sechium edule
SEGI_35987 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23904 Striga asiatica
SHI25215 Sapria himalayana
SHI38508 Sapria himalayana
SMO356G0436 Selaginella moellendorffii
Solyc03g123530.4 Solanum lycopersicum
Sopen03g041300 Solanum pennellii
Sp5g27520 Schrenkiella parvula
TAR383G0209 Trochodendron aralioides
TAR383G0400 Trochodendron aralioides
TAR628G1511 Trochodendron aralioides
THA.LOC104808063 Tarenaya hassleriana
Thecc.06G127400 Theobroma cacao
Thhalv10018056m.g Eutrema salsugineum
TPR.G16658 Trifolium pratense
TWI59G1220 Tripterygium wilfordii
unitig_26.g8921 Utricularia gibba
vmacro14085 Vaccinium macrocarpon
vmacro14086 Vaccinium macrocarpon
vmacro14087 Vaccinium macrocarpon
vmacro15070 Vaccinium macrocarpon
vmacro15071 Vaccinium macrocarpon
VMungo0331G1431 Vigna mungo
Zm00001eb008900 Zea mays
Zm00001eb429070 Zea mays

User provided reference genes

Program Settings