Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37170 Brassica napus
A06p39480 Brassica napus
Aa31LG3G14180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.283 Anthoceros agrestis
Actinidia14133 Actinidia chinensis
Actinidia23110 Actinidia chinensis
AL8G19880 Arabidopsis lyrata
Aqoxy5G02883 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35C0M2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48UY8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4NI9N6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75T26B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8NA9N0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AQUA2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX8VGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4C6EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7KJ0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7S8AY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU9C10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XUTR46 Arachis hypogaea
AT5G47890 Arabidopsis thaliana
ATR0582G276 Amborella trichopoda
Atru.chr12.1484 Acer truncatum
AUR62004226 Chenopodium quinoa
AUR62013622 Chenopodium quinoa
BcaB04g19540 Brassica carinata
BcaB07g30049 Brassica carinata
BcaC03g17619 Brassica carinata
BcaC04g23800 Brassica carinata
BolC2t11675H Brassica oleracea
BolC7t44398H Brassica oleracea
BolC9t53383H Brassica oleracea
BraA02t08703Z Brassica rapa
BraA06t26863Z Brassica rapa
C02p56190 Brassica napus
C07p38790 Brassica napus
C09p04540 Brassica napus
CANSAT01G3113 Cannabis sativa
CARHR184460 Cardamine hirsuta
Carub.0014s0003 Capsella rubella
Ca_01855_v3 Cicer arietinum L.
Cc01_g12390 Coffea canephora
CDE02G0654 Ceratophyllum demersum
CDE02G2760 Ceratophyllum demersum
Cfa012979 Carpinus fangiana
Ciclev10013280m.g Citrus clementina
Ciclev10026832m.g Citrus clementina
CiPaw.05G096900 Carya illinoinensis
CiPaw.06G112100 Carya illinoinensis
ClCG10G013160 Citrullus lanatus
COL.COLO4_25264 Corchorus olitorius
Cre16.g679500 Chlamydomonas reinhardtii
CSS0001472 Camellia sinensis var. sinensis
CSS0007870 Camellia sinensis var. sinensis
DCAR_005307 Daucus carota
Dinv26521 Davidia involucrata
Duzib150G1019 Durio zibethinus
Duzib168G1737 Durio zibethinus
ECA238G3917 Erigeron canadensis
EL10Ac1g00908 Beta vulgaris
Eucgr.B03411 Eucalyptus grandis
FAN16G3498 Fragaria x ananassa
FAN25G2289 Fragaria x ananassa
FvH4_3g23621 Fragaria vesca
Glyma.02G198800 Glycine max
Glyma.04G179100 Glycine max
Glyma.06G185600 Glycine max
Glyma.06G272300 Glycine max
Gohir.A09G105300 Gossypium hirsutum
Gohir.A13G220500 Gossypium hirsutum
Gohir.D09G102100 Gossypium hirsutum
Gohir.D13G224500 Gossypium hirsutum
Gorai.006G119400 Gossypium raimondii
Gorai.013G255300 Gossypium raimondii
GSVIVG01001135001 Vitis vinifera
HanXRQChr05g0134241 Helianthus annuus
HanXRQChr08g0228171 Helianthus annuus
Haze_21343 Corylus avellana
Haze_21349 Corylus avellana
Hma1.2p1_0738F.1_g211080 Hydrangea macrophylla
HPP92_001280 Vanilla planifolia
Hund07355 Selenicereus undatus
Hund21907 Selenicereus undatus
Lalb_Chr07g0194241 Lupinus albus
Lalb_Chr12g0209921 Lupinus albus
Lj3g0015814 Lotus japonicus
Lsat_1_v5_gn_1_32740 Lactuca sativa
Manes.08G098600 Manihot esculenta
Mapoly0012s0093 Marchantia polymorpha
MBI11_g22246_MAGBIO Magnolia biondii
MCO03G395 Micromonas commoda
MD03G1192500 Malus domestica
MD11G1209000 Malus domestica
Medtr2g034290 Medicago truncatula
Medtr8g012945 Medicago truncatula
MELO3C026758.2 Cucumis melo
Migut.D02119 Erythranthe guttata
MSTRG.18590 Avicennia marina
Nitab4.5_0001953g0110 Nicotiana tabacum
Nitab4.5_0002882g0010 Nicotiana tabacum
Nitab4.5_0009487g0020 Nicotiana tabacum
Nitab4.5_0009655g0030 Nicotiana tabacum
Oeu003268.1 Olea europaea
Os04g0310500 Oryza sativa ssp. japonica
Peaxi162Scf00679g00133 Petunia axillaris
PGR102G0153 Punica granatum
PGSC0003DMG400015529 Solanum tuberosum
PGSC0003DMG400030398 Solanum tuberosum
Phvul.009G181800 Phaseolus vulgaris
Potri.001G071900 Populus trichocarpa
Potri.003G159100 Populus trichocarpa
Pp3c20_8510 Physcomitrium patens
Pp3c23_15790 Physcomitrium patens
PRCOL_00006750 Prasinoderma coloniale
Prupe.4G224700 Prunus persica
Psat0s3432g0200 Pisum sativum
Psat1g160400 Pisum sativum
PSO541G3634 Papaver somniferum
PSO675G6660 Papaver somniferum
QL03p047951 Quercus lobata
RcHm_v2.0_Chr5g0041661 Rosa chinensis
Sabra01G0050500 Salix brachista
Sabra03G0115500 Salix brachista
SalBow3G2136 Salvia bowleyana
Sc03g0003970 Simmondsia chinensis
Sed0000673 Sechium edule
Sed0016956 Sechium edule
SEGI_06383 Sequoiadendron giganteum
SEGI_29862 Sequoiadendron giganteum
SHI02599 Sapria himalayana
SMO119G0159 Selaginella moellendorffii
Solyc06g075810.3 Solanum lycopersicum
Sopen06g032240 Solanum pennellii
Sp2g18390 Schrenkiella parvula
TAR718G0005 Trochodendron aralioides
TAR723G0001 Trochodendron aralioides
THA.LOC104807181 Tarenaya hassleriana
Thecc.09G262100 Theobroma cacao
Thhalv10005189m.g Eutrema salsugineum
TPR.G17128 Trifolium pratense
TPR.G27257 Trifolium pratense
TWI18G1269 Tripterygium wilfordii
TWI36G0882 Tripterygium wilfordii
unitig_736.g22438 Utricularia gibba
unitig_899.g14896 Utricularia gibba
vmacro05123 Vaccinium macrocarpon
Zm00001eb283340 Zea mays
Zm00001eb345800 Zea mays

User provided reference genes

Program Settings