Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12720 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis
Ah.08g215800 Amaranthus hybridus
Ah.09g232820 Amaranthus hybridus
AL5G37480 Arabidopsis lyrata
Aqoxy2G01214 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea
AT3G56160 Arabidopsis thaliana
ATR0081G026 Amborella trichopoda
Atru.chr12.1008 Acer truncatum
AUR62009772 Chenopodium quinoa
AUR62034504 Chenopodium quinoa
AUR62039218 Chenopodium quinoa
BraA02t06329Z Brassica rapa
BraA09t40366Z Brassica rapa
CAN.G54.5 Capsicum annuum
CARHR166310 Cardamine hirsuta
Carub.0005s2291 Capsella rubella
Ca_00262_v3 Cicer arietinum L.
Ca_12731_v3 Cicer arietinum L.
Ca_12794_v3 Cicer arietinum L.
Cc02_g09770 Coffea canephora
Cc02_g09780 Coffea canephora
CDE06G2329 Ceratophyllum demersum
CDE08G0076 Ceratophyllum demersum
Cfa010034 Carpinus fangiana
Cfa010314 Carpinus fangiana
Cfa024486 Carpinus fangiana
Ciclev10032297m.g Citrus clementina
Ciclev10033893m.g Citrus clementina
CiPaw.13G040200 Carya illinoinensis
CiPaw.14G101100 Carya illinoinensis
CiPaw.14G101300 Carya illinoinensis
ClCG02G008710 Citrullus lanatus
COL.COLO4_24555 Corchorus olitorius
COL.COLO4_24556 Corchorus olitorius
Cpa.g.sc183.10 Carica papaya
Cre02.g095085 Chlamydomonas reinhardtii
Cre02.g095086 Chlamydomonas reinhardtii
Cre02.g147450 Chlamydomonas reinhardtii
Cre06.g250450 Chlamydomonas reinhardtii
Cre09.g393250 Chlamydomonas reinhardtii
Cre09.g395700 Chlamydomonas reinhardtii
Cre12.g521950 Chlamydomonas reinhardtii
CsaV3_2G034960 Cucumis sativus L.
CSS0021342 Camellia sinensis var. sinensis
CSS0050380 Camellia sinensis var. sinensis
DCAR_006341 Daucus carota
Dinv11848 Davidia involucrata
Dinv42565 Davidia involucrata
Duzib106G1045 Durio zibethinus
Duzib128G0173 Durio zibethinus
ECA233G2289 Erigeron canadensis
ECA238G3155 Erigeron canadensis
EL10Ac7g15813 Beta vulgaris
EL10As25g24233 Beta vulgaris
Eucgr.B03869 Eucalyptus grandis
Eucgr.J00992 Eucalyptus grandis
FAN01G2288 Fragaria x ananassa
FAN01G2457 Fragaria x ananassa
FAN01G3081 Fragaria x ananassa
FAN03G1004 Fragaria x ananassa
FAN06G0036 Fragaria x ananassa
FAN06G1220 Fragaria x ananassa
FAN06G3794 Fragaria x ananassa
FAN10G1073 Fragaria x ananassa
FAN23G1474 Fragaria x ananassa
FAN23G1954 Fragaria x ananassa
FAN23G2695 Fragaria x ananassa
FvH4_7g05590 Fragaria vesca
FvH4_7g05870 Fragaria vesca
Glyma.10G111800 Glycine max
Gohir.A12G092722 Gossypium hirsutum
Gohir.D12G091480 Gossypium hirsutum
Gorai.008G099000 Gossypium raimondii
GSVIVG01011284001 Vitis vinifera
GSVIVG01034679001 Vitis vinifera
GSVIVG01036146001 Vitis vinifera
HanXRQChr08g0217571 Helianthus annuus
HanXRQChr08g0217771 Helianthus annuus
HanXRQChr11g0342201 Helianthus annuus
Haze_02484 Corylus avellana
Haze_02485 Corylus avellana
Haze_23392 Corylus avellana
Haze_23393 Corylus avellana
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla
HPP92_007815 Vanilla planifolia
Hund06778 Selenicereus undatus
Hund18750 Selenicereus undatus
Lalb_Chr19g0129181 Lupinus albus
Lj3A928T57 Lonicera japonica
Lj3C928T13 Lonicera japonica
Lj5g0026270 Lotus japonicus
Lsat_1_v5_gn_2_104621 Lactuca sativa
Lsat_1_v5_gn_8_23960 Lactuca sativa
Manes.10G058650 Manihot esculenta
Mapoly0046s0115 Marchantia polymorpha
MCO11G881 Micromonas commoda
MCO15G192 Micromonas commoda
MD02G1255900 Malus domestica
MD02G1256100 Malus domestica
MD02G1256200 Malus domestica
Medtr1g050462 Medicago truncatula
MELO3C034937.2 Cucumis melo
Migut.F01613 Erythranthe guttata
MSTRG.8110 Avicennia marina
Nitab4.5_0010225g0010 Nicotiana tabacum
Nn2g14130 Nelumbo nucifera
Oeu026579.1 Olea europaea
Os02g0531200 Oryza sativa ssp. japonica
Peaxi162Scf00235g10011 Petunia axillaris
PGR044G2170 Punica granatum
PGR102G2753 Punica granatum
Phvul.007G247700 Phaseolus vulgaris
Potri.008G021600 Populus trichocarpa
Pp3c3_30210 Physcomitrium patens
PRCOL_00003606 Prasinoderma coloniale
Prupe.2G079400 Prunus persica
Psat6g129720 Pisum sativum
Psat6g129760 Pisum sativum
QL01p012456 Quercus lobata
QL01p012462 Quercus lobata
QL04p046667 Quercus lobata
RcHm_v2.0_Chr1g0332541 Rosa chinensis
RcHm_v2.0_Chr1g0332551 Rosa chinensis
RcHm_v2.0_Chr1g0332571 Rosa chinensis
Rhsim03G0099700 Rhododendron simsii
Sabra08G0014600 Salix brachista
SalBow6G6867 Salvia bowleyana
Sc12g0004460 Simmondsia chinensis
Sed0016949 Sechium edule
SEGI_01082 Sequoiadendron giganteum
SEGI_13629 Sequoiadendron giganteum
SEGI_26426 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06459 Striga asiatica
SMO347G0520 Selaginella moellendorffii
Solyc07g014740.3 Solanum lycopersicum
Sp5g06340 Schrenkiella parvula
TAR623G1543 Trochodendron aralioides
THA.LOC104824209 Tarenaya hassleriana
Thecc.10G106400 Theobroma cacao
Thhalv10006005m.g Eutrema salsugineum
TPR.G10638 Trifolium pratense
unitig_578.g16343 Utricularia gibba
Zm00001eb242730 Zea mays
Zm00001eb296300 Zea mays

User provided reference genes

Program Settings