Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37930 Brassica napus
A06p38500 Brassica napus
Aa31LG11G8230 Aethionema arabicum
Actinidia23412 Actinidia chinensis
Ah.09g228330 Amaranthus hybridus
AL8G22790 Arabidopsis lyrata
Aqoxy1G01140 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.125U9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B38FIW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FDW9Z4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1UTGX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB0HQZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4TH9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQKG7P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V03Z72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W60CWR Arachis hypogaea
AT5G49210 Arabidopsis thaliana
ATR0745G004 Amborella trichopoda
Atru.chr4.1292 Acer truncatum
Atru.chr4.1296 Acer truncatum
AUR62006500 Chenopodium quinoa
AUR62025033 Chenopodium quinoa
BcaB04g19598 Brassica carinata
BcaB07g34140 Brassica carinata
BcaB07g34141 Brassica carinata
BcaC03g17706 Brassica carinata
BcaC06g30707 Brassica carinata
BcaNung02589 Brassica carinata
BolC2t11785H Brassica oleracea
BolC7t44502H Brassica oleracea
BolC9t53436H Brassica oleracea
BraA02t08777Z Brassica rapa
BraA06t26765Z Brassica rapa
C02p57130 Brassica napus
C07p39760 Brassica napus
C09p05140 Brassica napus
CAN.G765.25 Capsicum annuum
CANSAT78G0571 Cannabis sativa
CARHR150300 Cardamine hirsuta
CARHR182460 Cardamine hirsuta
Carub.0008s0903 Capsella rubella
Ca_04063_v3 Cicer arietinum L.
Ca_04069_v3 Cicer arietinum L.
Cc03_g08040 Coffea canephora
CDE04G1543 Ceratophyllum demersum
CDE07G0811 Ceratophyllum demersum
Cfa014943 Carpinus fangiana
Ciclev10005973m.g Citrus clementina
CiPaw.01G118900 Carya illinoinensis
COL.COLO4_20183 Corchorus olitorius
Cpa.g.sc150.53 Carica papaya
Cpa.g.sc170.49 Carica papaya
CsaV3_3G010880 Cucumis sativus L.
CSS0003459 Camellia sinensis var. sinensis
CSS0041532 Camellia sinensis var. sinensis
CSS0044809 Camellia sinensis var. sinensis
DCAR_026627 Daucus carota
Dinv27216 Davidia involucrata
Dinv38211 Davidia involucrata
Duzib212G0867 Durio zibethinus
ECA247G1905 Erigeron canadensis
EL10Ac9g22415 Beta vulgaris
EL10Ac9g22416 Beta vulgaris
Eucgr.G02600 Eucalyptus grandis
FAN07G0218 Fragaria x ananassa
FAN07G1641 Fragaria x ananassa
FAN12G0303 Fragaria x ananassa
FAN12G1864 Fragaria x ananassa
FAN17G0047 Fragaria x ananassa
FAN17G2161 Fragaria x ananassa
FAN22G0582 Fragaria x ananassa
FAN22G2287 Fragaria x ananassa
FvH4_4g13570 Fragaria vesca
FvH4_4g13580 Fragaria vesca
Glyma.08G364400 Glycine max
Glyma.18G297700 Glycine max
Gohir.A10G126200 Gossypium hirsutum
Gohir.D10G140500 Gossypium hirsutum
Gorai.011G156100 Gossypium raimondii
GSVIVG01020921001 Vitis vinifera
HanXRQChr13g0420931 Helianthus annuus
Haze_11630 Corylus avellana
Hma1.2p1_0383F.1_g140630 Hydrangea macrophylla
HPP92_021062 Vanilla planifolia
Hund18997 Selenicereus undatus
Lalb_Chr01g0000091 Lupinus albus
Lj1g0014719 Lotus japonicus
Lj1g0023949 Lotus japonicus
Lj3P401T12 Lonicera japonica
Lj8A15T45 Lonicera japonica
Lsat_1_v5_gn_2_46320 Lactuca sativa
Lsat_1_v5_gn_6_60821 Lactuca sativa
Manes.02G208300 Manihot esculenta
Manes.10G081400 Manihot esculenta
MD12G1086100 Malus domestica
MD14G1080700 Malus domestica
Medtr1g025570 Medicago truncatula
Medtr7g407030 Medicago truncatula
MELO3C006306.2 Cucumis melo
Migut.G00717 Erythranthe guttata
Migut.N00403 Erythranthe guttata
MSTRG.4232 Avicennia marina
MSTRG.9809 Avicennia marina
Nitab4.5_0002260g0170 Nicotiana tabacum
Nitab4.5_0003502g0080 Nicotiana tabacum
Oeu006186.1 Olea europaea
Oeu025020.1 Olea europaea
Os11g0148600 Oryza sativa ssp. japonica
Os12g0146400 Oryza sativa ssp. japonica
Peaxi162Scf00423g00316 Petunia axillaris
PGR042G2541 Punica granatum
PGSC0003DMG400015756 Solanum tuberosum
Phvul.008G004900 Phaseolus vulgaris
Potri.001G317300 Populus trichocarpa
Prupe.1G159300 Prunus persica
Psat3g206160 Pisum sativum
Psat6g003280 Pisum sativum
PSO541G4502 Papaver somniferum
PSO675G5536 Papaver somniferum
QL01p037004 Quercus lobata
QL07p041720 Quercus lobata
RcHm_v2.0_Chr4g0414321 Rosa chinensis
RcHm_v2.0_Chr4g0414331 Rosa chinensis
Rhsim02G0060400 Rhododendron simsii
Sabra16G0200700 Salix brachista
SalBow8G4870 Salvia bowleyana
Sc19g0007210 Simmondsia chinensis
Sc19g0007290 Simmondsia chinensis
Sed0002608 Sechium edule
SEGI_31023 Sequoiadendron giganteum
SGA_v2.0_scaffold128G34119 Striga asiatica
SGA_v2.0_scaffold90G27899 Striga asiatica
Solyc05g053730.3 Solanum lycopersicum
Sopen05g032210 Solanum pennellii
Sp2g19580 Schrenkiella parvula
TAR636G2803 Trochodendron aralioides
THA.LOC104808705 Tarenaya hassleriana
Thecc.04G199600 Theobroma cacao
Thhalv10004918m.g Eutrema salsugineum
Thhalv10009372m.g Eutrema salsugineum
TPR.G1371 Trifolium pratense
TPR.G26387 Trifolium pratense
TWI34G0245 Tripterygium wilfordii
TWI34G1372 Tripterygium wilfordii
unitig_26.g9510 Utricularia gibba
vmacro15554 Vaccinium macrocarpon
VMungo1383G0426 Vigna mungo
Zm00001eb092840 Zea mays

User provided reference genes

Program Settings