Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10740 Brassica napus
A08p25180 Brassica napus
A09p37060 Brassica napus
Aa31LG6G6240 Aethionema arabicum
Actinidia12585 Actinidia chinensis
Actinidia18806 Actinidia chinensis
Ah.14g086980 Amaranthus hybridus
AL1G43080 Arabidopsis lyrata
Aqoxy1G01972 Aquilegia oxysepala
Aqoxy4G00224 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea
AT1G29290 Arabidopsis thaliana
ATR0127G031 Amborella trichopoda
Atru.chr10.1568 Acer truncatum
AUR62019592 Chenopodium quinoa
AUR62037560 Chenopodium quinoa
AUR62039479 Chenopodium quinoa
BcaB03g12151 Brassica carinata
BcaB03g13892 Brassica carinata
BcaB07g32517 Brassica carinata
BcaC01g00093 Brassica carinata
BcaC05g26955 Brassica carinata
BcaC06g35423 Brassica carinata
BolC3t19830H Brassica oleracea
BolC5t31533H Brassica oleracea
BolC7t42128H Brassica oleracea
BraA07t28869Z Brassica rapa
BraA08t34472Z Brassica rapa
BraA09t39221Z Brassica rapa
C03p75700 Brassica napus
C05p28050 Brassica napus
C07p16340 Brassica napus
CAN.G375.23 Capsicum annuum
CAN.G411.50 Capsicum annuum
CARHR028610 Cardamine hirsuta
Carub.0001s2751 Capsella rubella
Ca_00473_v3 Cicer arietinum L.
Ca_17896_v3 Cicer arietinum L.
Cc02_g15600 Coffea canephora
Cfa000656 Carpinus fangiana
Ciclev10018148m.g Citrus clementina
CiPaw.09G073100 Carya illinoinensis
CiPaw.10G061800 Carya illinoinensis
CiPaw.11G159100 Carya illinoinensis
ClCG01G023900 Citrullus lanatus
COL.COLO4_31233 Corchorus olitorius
CSS0000215 Camellia sinensis var. sinensis
CSS0004272 Camellia sinensis var. sinensis
CSS0038855 Camellia sinensis var. sinensis
DCAR_005145 Daucus carota
DCAR_013163 Daucus carota
DCAR_027979 Daucus carota
DCAR_027980 Daucus carota
Dinv12751 Davidia involucrata
Dinv12752 Davidia involucrata
Dinv15004 Davidia involucrata
Dinv32337 Davidia involucrata
EL10Ac4g08366 Beta vulgaris
EL10Ac8g20558 Beta vulgaris
Eucgr.D00466 Eucalyptus grandis
FAN11G2282 Fragaria x ananassa
FAN16G0464 Fragaria x ananassa
FAN21G0043 Fragaria x ananassa
FAN25G1124 Fragaria x ananassa
FvH4_3g07300 Fragaria vesca
Glyma.05G161100 Glycine max
Glyma.08G118500 Glycine max
Glyma.13G226600 Glycine max
Glyma.15G085800 Glycine max
Gohir.A05G153400 Gossypium hirsutum
Gohir.A06G133800 Gossypium hirsutum
Gohir.D05G156000 Gossypium hirsutum
Gohir.D06G138900 Gossypium hirsutum
Gorai.009G160500 Gossypium raimondii
Gorai.010G161500 Gossypium raimondii
Haze_06169 Corylus avellana
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla
Hma1.2p1_0373F.1_g138420 Hydrangea macrophylla
Hma1.2p1_1016F.1_g248040 Hydrangea macrophylla
Lalb_Chr13g0295291 Lupinus albus
Lalb_Chr15g0086331 Lupinus albus
Lalb_Chr18g0054771 Lupinus albus
Lj4g0014521 Lotus japonicus
Lj6g0009726 Lotus japonicus
Lsat_1_v5_gn_7_102321 Lactuca sativa
Lsat_1_v5_gn_7_102341 Lactuca sativa
Lsat_1_v5_gn_7_102441 Lactuca sativa
Lsat_1_v5_gn_7_25601 Lactuca sativa
Manes.15G096175 Manihot esculenta
Manes.16G042800 Manihot esculenta
Manes.17G059300 Manihot esculenta
MBI06_g16696_MAGBIO Magnolia biondii
MBI07_g00460_MAGBIO Magnolia biondii
MD00G1009200 Malus domestica
MD00G1221100 Malus domestica
MD10G1275500 Malus domestica
Medtr2g016800 Medicago truncatula
Medtr8g087390 Medicago truncatula
MELO3C035718.2 Cucumis melo
Migut.H01411 Erythranthe guttata
Migut.M01008 Erythranthe guttata
MSTRG.13233 Avicennia marina
MSTRG.7430 Avicennia marina
Nitab4.5_0000788g0070 Nicotiana tabacum
Nitab4.5_0006663g0010 Nicotiana tabacum
Nn3g21078 Nelumbo nucifera
Nn6g34461 Nelumbo nucifera
Oeu040922.1 Olea europaea
Oeu043118.1 Olea europaea
Oeu060173.1 Olea europaea
Oeu060178.1 Olea europaea
Oeu061362.1 Olea europaea
PGR042G3020 Punica granatum
PGSC0003DMG400028485 Solanum tuberosum
Phvul.002G241108 Phaseolus vulgaris
Phvul.006G173000 Phaseolus vulgaris
Potri.004G061300 Populus trichocarpa
Potri.011G070500 Populus trichocarpa
Prupe.4G067000 Prunus persica
Psat1g194640 Pisum sativum
Psat7g068640 Pisum sativum
PSO339G2616 Papaver somniferum
QL05p049931 Quercus lobata
RcHm_v2.0_Chr5g0011661 Rosa chinensis
Rhsim13G0187700 Rhododendron simsii
Rhsim13G0187800 Rhododendron simsii
Sabra04G0040600 Salix brachista
Sabra11G0055200 Salix brachista
SalBow7G3765 Salvia bowleyana
SalBow8G0022 Salvia bowleyana
Sed0013946 Sechium edule
SGA_v2.0_scaffold1G00085 Striga asiatica
Sopen02g021130 Solanum pennellii
Sp1g25220 Schrenkiella parvula
TAR624G0770 Trochodendron aralioides
TAR624G0872 Trochodendron aralioides
TAR626G0600 Trochodendron aralioides
TAR627G0061 Trochodendron aralioides
TAR627G0439 Trochodendron aralioides
TAR629G2882 Trochodendron aralioides
THA.LOC104820608 Tarenaya hassleriana
Thecc.06G165400 Theobroma cacao
Thhalv10009585m.g Eutrema salsugineum
TPR.G4530 Trifolium pratense
TPR.G6728 Trifolium pratense
TWI53G1149 Tripterygium wilfordii
unitig_744.g24543 Utricularia gibba

User provided reference genes

Program Settings