Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05980 Brassica napus
A03p09780 Brassica napus
Aa31sc170G10 Aethionema arabicum
Aa31sc64G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2160 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.390 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2293 Anthoceros agrestis
Actinidia12556 Actinidia chinensis
Ah.06g185120 Amaranthus hybridus
Ah.06g185130 Amaranthus hybridus
AL6G31580 Arabidopsis lyrata
Aqoxy3G02852 Aquilegia oxysepala
Aqoxy4G00472 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1K9JH7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.254HEG Arachis hypogaea
AT5G20040 Arabidopsis thaliana
ATR0602G274 Amborella trichopoda
ATR0743G275 Amborella trichopoda
Atru.chr2.2244 Acer truncatum
AUR62019538 Chenopodium quinoa
AUR62036100 Chenopodium quinoa
BcaB01g04815 Brassica carinata
BcaB05g22884 Brassica carinata
BcaC03g13727 Brassica carinata
BcaNung05984 Brassica carinata
BcaNung05985 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01860 Brassica napus
BolC2t07004H Brassica oleracea
BolC3t13609H Brassica oleracea
BraA02t05550Z Brassica rapa
BraA03t10293Z Brassica rapa
C03p11360 Brassica napus
CAN.G292.8 Capsicum annuum
CANSAT35G0899 Cannabis sativa
CARHR192800 Cardamine hirsuta
Carub.0006s1841 Capsella rubella
Ca_04006_v3 Cicer arietinum L.
Cc02_g32310 Coffea canephora
Cc05_g11380 Coffea canephora
CDE02G4231 Ceratophyllum demersum
CDE10G0066 Ceratophyllum demersum
CDE10G0422 Ceratophyllum demersum
Cfa019592 Carpinus fangiana
Ciclev10008222m.g Citrus clementina
CiPaw.11G163000 Carya illinoinensis
ClCG07G009980 Citrullus lanatus
Cpa.g.sc131.64 Carica papaya
Cre17.g717350 Chlamydomonas reinhardtii
CsaV3_4G008350 Cucumis sativus L.
DCAR_013144 Daucus carota
Dinv06233 Davidia involucrata
Dinv14969 Davidia involucrata
Duzib213G0103 Durio zibethinus
ECA240G2410 Erigeron canadensis
EL10Ac4g08316 Beta vulgaris
Eucgr.F01210 Eucalyptus grandis
FAN04G2712 Fragaria x ananassa
FAN16G0072 Fragaria x ananassa
FAN21G0251 Fragaria x ananassa
FAN25G1310 Fragaria x ananassa
FvH4_3g18660 Fragaria vesca
Glyma.13G271500 Glycine max
Gohir.A04G038500 Gossypium hirsutum
Gohir.D05G344500 Gossypium hirsutum
Gorai.009G372500 Gossypium raimondii
GSVIVG01014230001 Vitis vinifera
HanXRQChr13g0389111 Helianthus annuus
Haze_09351 Corylus avellana
HPP92_012839 Vanilla planifolia
Hund02369 Selenicereus undatus
Lalb_Chr25g0285991 Lupinus albus
Lj1A833T50 Lonicera japonica
Lj3g0015470 Lotus japonicus
Lsat_1_v5_gn_2_6620 Lactuca sativa
Lsat_1_v5_gn_9_99580 Lactuca sativa
Manes.15G092000 Manihot esculenta
Mapoly0012s0089 Marchantia polymorpha
Mapoly0033s0012 Marchantia polymorpha
MBI06_g18006_MAGBIO Magnolia biondii
MCO11G386 Micromonas commoda
MD03G1240200 Malus domestica
MD11G1259500 Malus domestica
Medtr2g078120 Medicago truncatula
MELO3C016098.2 Cucumis melo
Migut.M00745 Erythranthe guttata
MSTRG.6806 Avicennia marina
Nitab4.5_0000035g0040 Nicotiana tabacum
Nitab4.5_0005440g0050 Nicotiana tabacum
Nn1g04357 Nelumbo nucifera
Oeu025338.1 Olea europaea
Peaxi162Scf01503g00020 Petunia axillaris
Peaxi162Scf01503g00021 Petunia axillaris
PGR083G1414 Punica granatum
PGSC0003DMG400015380 Solanum tuberosum
Phvul.005G067800 Phaseolus vulgaris
Potri.001G376600 Populus trichocarpa
Pp3c16_6080 Physcomitrium patens
Pp3c23_12150 Physcomitrium patens
Pp3c23_12330 Physcomitrium patens
Pp3c23_12370 Physcomitrium patens
Pp3c27_70 Physcomitrium patens
Pp3c3_37040 Physcomitrium patens
Pp3c5_9400 Physcomitrium patens
Pp3c6_21360 Physcomitrium patens
PRCOL_00003063 Prasinoderma coloniale
Prupe.4G170400 Prunus persica
Psat5g239800 Pisum sativum
PSO063G4771 Papaver somniferum
PSO782G0219 Papaver somniferum
QL08p026888 Quercus lobata
RcHm_v2.0_Chr0c28g0500961 Rosa chinensis
RcHm_v2.0_Chr0c28g0500971 Rosa chinensis
RcHm_v2.0_Chr0c28g0501011 Rosa chinensis
RcHm_v2.0_Chr0c28g0501061 Rosa chinensis
RcHm_v2.0_Chr1g0325431 Rosa chinensis
RcHm_v2.0_Chr3g0490501 Rosa chinensis
RcHm_v2.0_Chr5g0031481 Rosa chinensis
RcHm_v2.0_Chr5g0052511 Rosa chinensis
RcHm_v2.0_Chr6g0273141 Rosa chinensis
RcHm_v2.0_Chr7g0217341 Rosa chinensis
RcHm_v2.0_Chr7g0243561 Rosa chinensis
RcHm_v2.0_Chr7g0243571 Rosa chinensis
RcHm_v2.0_Chr7g0243611 Rosa chinensis
Rhsim06G0205400 Rhododendron simsii
Sabra16G0248000 Salix brachista
SalBow8G2403 Salvia bowleyana
Sc16g0007450 Simmondsia chinensis
Sed0010915 Sechium edule
SEGI_11854 Sequoiadendron giganteum
SEGI_25631 Sequoiadendron giganteum
SEGI_34325 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43342 Striga asiatica
SGA_v2.0_scaffold73G24201 Striga asiatica
SMO116G0058 Selaginella moellendorffii
Solyc12g014190.2 Solanum lycopersicum
Sopen12g005980 Solanum pennellii
Sp6g24360 Schrenkiella parvula
TAR629G2461 Trochodendron aralioides
THA.LOC104799653 Tarenaya hassleriana
Thecc.07G105000 Theobroma cacao
Thhalv10013462m.g Eutrema salsugineum
TPR.G9221 Trifolium pratense
unitig_85.g27415 Utricularia gibba
unitig_86.g29833 Utricularia gibba
vmacro11912 Vaccinium macrocarpon
VMungo1080G1072 Vigna mungo
VMungo1080G1419 Vigna mungo
Zm00001eb271810 Zea mays

User provided reference genes

Program Settings