Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55700 Brassica napus
Aa31LG2G17830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.161 Anthoceros agrestis
Actinidia14094 Actinidia chinensis
Actinidia14591 Actinidia chinensis
Actinidia22328 Actinidia chinensis
Actinidia33783 Actinidia chinensis
AL4G16690 Arabidopsis lyrata
AL7G19730 Arabidopsis lyrata
Aqoxy7G03608 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49IL45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1LVA5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NJ6IKW Arachis hypogaea
AT2G25310 Arabidopsis thaliana
AT4G32130 Arabidopsis thaliana
ATR0767G140 Amborella trichopoda
AUR62012426 Chenopodium quinoa
AUR62031549 Chenopodium quinoa
BcaB08g35175 Brassica carinata
BcaC07g40871 Brassica carinata
BcaC09g52000 Brassica carinata
BcaNung03140 Brassica carinata
BolC1t00678H Brassica oleracea
BolC8t51440H Brassica oleracea
BraA01t00585Z Brassica rapa
BraA09t40971Z Brassica rapa
C08p38700 Brassica napus
CAN.G1475.8 Capsicum annuum
CAN.G9.14 Capsicum annuum
CANSAT78G0154 Cannabis sativa
CARHR116210 Cardamine hirsuta
CARHR240040 Cardamine hirsuta
CARHR240050 Cardamine hirsuta
Carub.0004s0494 Capsella rubella
Carub.0007s0843 Capsella rubella
Ca_15755_v3 Cicer arietinum L.
CBR_g24053 Chara braunii
Cc08_g00410 Coffea canephora
CDE01G0036 Ceratophyllum demersum
CDE01G0528 Ceratophyllum demersum
CDE12G0076 Ceratophyllum demersum
Ciclev10009464m.g Citrus clementina
CiPaw.07G225400 Carya illinoinensis
CiPaw.08G009700 Carya illinoinensis
ClCG05G016710 Citrullus lanatus
Cpa.g.sc187.3 Carica papaya
Cre07.g340650 Chlamydomonas reinhardtii
CsaV3_3G046210 Cucumis sativus L.
CSS0023128 Camellia sinensis var. sinensis
CSS0023723 Camellia sinensis var. sinensis
CSS0024153 Camellia sinensis var. sinensis
CSS0037696 Camellia sinensis var. sinensis
DCAR_001545 Daucus carota
Dinv18198 Davidia involucrata
Duzib187G0432 Durio zibethinus
ECA233G2586 Erigeron canadensis
EL10Ac1g01779 Beta vulgaris
EL10Ac2g04185 Beta vulgaris
Eucgr.C02743 Eucalyptus grandis
FAN20G0036 Fragaria x ananassa
FAN24G3113 Fragaria x ananassa
FAN27G2872 Fragaria x ananassa
FvH4_2g28770 Fragaria vesca
FvH4_6g38550 Fragaria vesca
Glyma.04G065200 Glycine max
Glyma.06G066400 Glycine max
Gohir.A06G099200 Gossypium hirsutum
Gohir.A07G029500 Gossypium hirsutum
Gohir.D06G101400 Gossypium hirsutum
Gohir.D07G033500 Gossypium hirsutum
Gorai.001G035100 Gossypium raimondii
Gorai.010G116300 Gossypium raimondii
GSVIVG01035953001 Vitis vinifera
HanXRQChr02g0050341 Helianthus annuus
HanXRQChr13g0403241 Helianthus annuus
Haze_21489 Corylus avellana
HPP92_000468 Vanilla planifolia
HPP92_000478 Vanilla planifolia
Hund25870 Selenicereus undatus
Lalb_Chr08g0244231 Lupinus albus
Lalb_Chr23g0268431 Lupinus albus
Lj1g0015588 Lotus japonicus
Lj8A723T59 Lonicera japonica
Lsat_1_v5_gn_6_20280 Lactuca sativa
Manes.03G012900 Manihot esculenta
Manes.16G124300 Manihot esculenta
Mapoly0003s0100 Marchantia polymorpha
MBI14_g36925_MAGBIO Magnolia biondii
MCO11G876 Micromonas commoda
MD08G1157200 Malus domestica
MD15G1128300 Malus domestica
Medtr3g106570 Medicago truncatula
MELO3C003718.2 Cucumis melo
Migut.A00022 Erythranthe guttata
MSTRG.26017 Avicennia marina
Nitab4.5_0000109g0420 Nicotiana tabacum
Nitab4.5_0000857g0140 Nicotiana tabacum
Nitab4.5_0003389g0010 Nicotiana tabacum
Nitab4.5_0005785g0040 Nicotiana tabacum
Nitab4.5_0006784g0020 Nicotiana tabacum
Nn2g12158 Nelumbo nucifera
Oeu024982.1 Olea europaea
Os06g0644100 Oryza sativa ssp. japonica
Peaxi162Scf00136g00153 Petunia axillaris
PGR083G2649 Punica granatum
PGSC0003DMG400029900 Solanum tuberosum
Phvul.009G091300 Phaseolus vulgaris
Potri.006G257100 Populus trichocarpa
Potri.018G024600 Populus trichocarpa
Pp3c25_10780 Physcomitrium patens
Prupe.1G483600 Prunus persica
Psat5g031480 Pisum sativum
PSO017G3131 Papaver somniferum
PSO170G1976 Papaver somniferum
QL02p021123 Quercus lobata
RcHm_v2.0_Chr6g0297531 Rosa chinensis
Rhsim02G0203400 Rhododendron simsii
SalBow4G2693 Salvia bowleyana
Sc06g0000550 Simmondsia chinensis
Sed0004415 Sechium edule
Sed0027504 Sechium edule
SGA_v2.0_scaffold64G21960 Striga asiatica
SMO354G0008 Selaginella moellendorffii
SMO364G0469 Selaginella moellendorffii
Solyc06g065930.4 Solanum lycopersicum
Solyc08g041980.3 Solanum lycopersicum
Sopen06g024410 Solanum pennellii
Sopen08g012360 Solanum pennellii
Sp4g04450 Schrenkiella parvula
Sp7g29920 Schrenkiella parvula
TAR625G0984 Trochodendron aralioides
TAR626G0177 Trochodendron aralioides
THA.LOC104803647 Tarenaya hassleriana
THA.LOC104803846 Tarenaya hassleriana
Thecc.09G021500 Theobroma cacao
Thhalv10000323m.g Eutrema salsugineum
Thhalv10026275m.g Eutrema salsugineum
TPR.G18056 Trifolium pratense
TPR.G3145 Trifolium pratense
TWI32G1290 Tripterygium wilfordii
unitig_0.g694 Utricularia gibba
vmacro11190 Vaccinium macrocarpon
VMungo1309G0253 Vigna mungo
Zm00001eb149990 Zea mays
Zm00001eb260650 Zea mays
Zm00001eb275230 Zea mays
Zm00001eb279560 Zea mays
Zm00001eb387020 Zea mays

User provided reference genes

Program Settings