Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p10150 Brassica napus
Aa31LG1G14600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis
Actinidia17421 Actinidia chinensis
Actinidia22954 Actinidia chinensis
Actinidia28717 Actinidia chinensis
Ah.03g149130 Amaranthus hybridus
AL8G45470 Arabidopsis lyrata
Aqoxy4G02022 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea
AT5G66120 Arabidopsis thaliana
ATR0712G043 Amborella trichopoda
Atru.chr3.855 Acer truncatum
AUR62003338 Chenopodium quinoa
AUR62029500 Chenopodium quinoa
BcaB04g20124 Brassica carinata
BcaC04g23113 Brassica carinata
BolC9t54093H Brassica oleracea
BraA09t36659Z Brassica rapa
C09p12030 Brassica napus
CAN.G1274.31 Capsicum annuum
CANSAT25G2560 Cannabis sativa
CARHR281630 Cardamine hirsuta
Carub.0008s2837 Capsella rubella
Ca_24920_v3 Cicer arietinum L.
CBR_g10969 Chara braunii
Cc07_g11060 Coffea canephora
CDE02G1558 Ceratophyllum demersum
CDE02G2775 Ceratophyllum demersum
CDE04G1415 Ceratophyllum demersum
CDE04G1456 Ceratophyllum demersum
Cfa007001 Carpinus fangiana
Ciclev10025711m.g Citrus clementina
CiPaw.07G061100 Carya illinoinensis
CiPaw.08G130500 Carya illinoinensis
ClCG10G000590 Citrullus lanatus
COL.COLO4_22462 Corchorus olitorius
Cpa.g.sc6.286 Carica papaya
Cre08.g368950 Chlamydomonas reinhardtii
CsaV3_3G000670 Cucumis sativus L.
CSS0012363 Camellia sinensis var. sinensis
CSS0040013 Camellia sinensis var. sinensis
DCAR_004721 Daucus carota
DCAR_004732 Daucus carota
DCAR_022909 Daucus carota
Dinv33661 Davidia involucrata
Dinv33662 Davidia involucrata
Dinv40116 Davidia involucrata
Duzib147G0491 Durio zibethinus
ECA240G3065 Erigeron canadensis
EL10Ac6g15523 Beta vulgaris
Eucgr.J02467 Eucalyptus grandis
FAN19G0738 Fragaria x ananassa
FAN23G2381 Fragaria x ananassa
FAN26G3360 Fragaria x ananassa
FAN28G0876 Fragaria x ananassa
FvH4_1g11430 Fragaria vesca
Glyma.01G164300 Glycine max
Glyma.11G078700 Glycine max
Gohir.A11G173500 Gossypium hirsutum
Gohir.A12G058900 Gossypium hirsutum
Gohir.D11G180500 Gossypium hirsutum
Gohir.D12G058900 Gossypium hirsutum
Gorai.007G192400 Gossypium raimondii
Gorai.008G062200 Gossypium raimondii
GSVIVG01018732001 Vitis vinifera
HanXRQChr13g0424561 Helianthus annuus
Haze_03731 Corylus avellana
Haze_27270 Corylus avellana
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla
HPP92_025909 Vanilla planifolia
HPP92_025914 Vanilla planifolia
Hund16503 Selenicereus undatus
Lalb_Chr05g0212261 Lupinus albus
Lalb_Chr09g0321611 Lupinus albus
Lj2g0011110 Lotus japonicus
Lj4A222T51 Lonicera japonica
Lsat_1_v5_gn_0_46241 Lactuca sativa
Lsat_1_v5_gn_3_125660 Lactuca sativa
Manes.02G107200 Manihot esculenta
Mapoly0031s0094 Marchantia polymorpha
MBI05_g23388_MAGBIO Magnolia biondii
MCO01G625 Micromonas commoda
MD02G1126200 Malus domestica
MD14G1099300 Malus domestica
MD15G1242600 Malus domestica
Medtr5g022580 Medicago truncatula
MELO3C013755.2 Cucumis melo
Migut.C00533 Erythranthe guttata
MSTRG.2728 Avicennia marina
Nitab4.5_0001892g0080 Nicotiana tabacum
Nitab4.5_0008943g0020 Nicotiana tabacum
Nn1g06262 Nelumbo nucifera
Nn5g28565 Nelumbo nucifera
Oeu048477.1 Olea europaea
Os09g0539100 Oryza sativa ssp. japonica
Peaxi162Scf00328g00523 Petunia axillaris
PGR102G0465 Punica granatum
PGSC0003DMG400003582 Solanum tuberosum
Phvul.002G106700 Phaseolus vulgaris
Potri.005G110900 Populus trichocarpa
Pp3c13_24150 Physcomitrium patens
PRCOL_00000314 Prasinoderma coloniale
Prupe.7G171600 Prunus persica
Psat2g153160 Pisum sativum
PSO541G6199 Papaver somniferum
PSO675G6089 Papaver somniferum
QL06p051082 Quercus lobata
RcHm_v2.0_Chr2g0099011 Rosa chinensis
RcHm_v2.0_Chr2g0099021 Rosa chinensis
Rhsim07G0135500 Rhododendron simsii
Rhsim07G0135600 Rhododendron simsii
Rhsim07G0143100 Rhododendron simsii
Rhsim08G0032100 Rhododendron simsii
Sabra05G0090900 Salix brachista
SalBow3G4284 Salvia bowleyana
Sc03g0003700 Simmondsia chinensis
Sed0003793 Sechium edule
SEGI_08539 Sequoiadendron giganteum
SEGI_14262 Sequoiadendron giganteum
SEGI_17140 Sequoiadendron giganteum
SEGI_22853 Sequoiadendron giganteum
SEGI_34573 Sequoiadendron giganteum
SEGI_40904 Sequoiadendron giganteum
SGA_v2.0_scaffold273G46395 Striga asiatica
SGA_v2.0_scaffold94G28549 Striga asiatica
SMO228G0049 Selaginella moellendorffii
Solyc02g083590.3 Solanum lycopersicum
Sopen02g028370 Solanum pennellii
Sp2g30570 Schrenkiella parvula
TAR381G1626 Trochodendron aralioides
THA.LOC104821339 Tarenaya hassleriana
Thecc.01G014600 Theobroma cacao
Thhalv10004219m.g Eutrema salsugineum
TPR.G10519 Trifolium pratense
TPR.G10542 Trifolium pratense
TPR.G6592 Trifolium pratense
TWI09G1579 Tripterygium wilfordii
TWI53G1960 Tripterygium wilfordii
unitig_699.g19702 Utricularia gibba
unitig_699.g19703 Utricularia gibba
vmacro18426 Vaccinium macrocarpon
vmacro22193 Vaccinium macrocarpon
VMungo1215G2918 Vigna mungo
Zm00001eb103800 Zea mays
Zm00001eb331970 Zea mays

User provided reference genes

Program Settings