Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41070 Brassica napus
Aa31LG5G17700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis
Actinidia30063 Actinidia chinensis
Actinidia31469 Actinidia chinensis
Ah.02g115620 Amaranthus hybridus
AL3G18390 Arabidopsis lyrata
Aqoxy4G00040 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea
AT3G07140 Arabidopsis thaliana
ATR0564G162 Amborella trichopoda
Atru.chr6.1506 Acer truncatum
AUR62001109 Chenopodium quinoa
AUR62008933 Chenopodium quinoa
BcaC05g29752 Brassica carinata
BcaC05g29842 Brassica carinata
BolC5t34674H Brassica oleracea
BraA05t22834Z Brassica rapa
C05p60240 Brassica napus
CAN.G3.1 Capsicum annuum
CARHR081740 Cardamine hirsuta
Carub.0003s0666 Capsella rubella
Ca_23236_v3 Cicer arietinum L.
Ca_23237_v3 Cicer arietinum L.
CBR_g44939 Chara braunii
Cc01_g16860 Coffea canephora
CDE05G0682 Ceratophyllum demersum
Cfa002585 Carpinus fangiana
Cfa025345 Carpinus fangiana
Ciclev10019161m.g Citrus clementina
CiPaw.03G147700 Carya illinoinensis
ClCG09G008890 Citrullus lanatus
COL.COLO4_15648 Corchorus olitorius
COL.COLO4_36899 Corchorus olitorius
Cpa.g.sc8.135 Carica papaya
Cre10.g441100 Chlamydomonas reinhardtii
CsaV3_7G026000 Cucumis sativus L.
CSS0047345 Camellia sinensis var. sinensis
DCAR_012658 Daucus carota
Dinv19188 Davidia involucrata
Duzib138G1384 Durio zibethinus
Duzib211G0096 Durio zibethinus
ECA236G0910 Erigeron canadensis
EL10Ac7g17867 Beta vulgaris
Eucgr.E03305 Eucalyptus grandis
FAN15G1450 Fragaria x ananassa
FAN24G2416 Fragaria x ananassa
FAN27G0551 Fragaria x ananassa
FvH4_2g18730 Fragaria vesca
Glyma.03G064400 Glycine max
Glyma.13G059866 Glycine max
Glyma.13G182400 Glycine max
Glyma.13G196100 Glycine max
Glyma.13G258850 Glycine max
Glyma.13G258901 Glycine max
Glyma.13G368066 Glycine max
Glyma.13G368132 Glycine max
Glyma.16G101100 Glycine max
Gohir.A07G158000 Gossypium hirsutum
Gohir.A11G139100 Gossypium hirsutum
Gohir.D07G164100 Gossypium hirsutum
Gohir.D11G145300 Gossypium hirsutum
Gorai.001G188000 Gossypium raimondii
Gorai.007G155800 Gossypium raimondii
GSVIVG01011065001 Vitis vinifera
HanXRQChr04g0108251 Helianthus annuus
Haze_24821 Corylus avellana
HPP92_008216 Vanilla planifolia
Hund18405 Selenicereus undatus
Hund18406 Selenicereus undatus
Lalb_Chr13g0291091 Lupinus albus
Lj2A1128T45 Lonicera japonica
Lj3g0013392 Lotus japonicus
Lsat_1_v5_gn_5_150541 Lactuca sativa
Lsat_1_v5_gn_8_89520 Lactuca sativa
Manes.13G046400 Manihot esculenta
Mapoly0173s0012 Marchantia polymorpha
MCO05G006 Micromonas commoda
MD13G1217900 Malus domestica
MD16G1223000 Malus domestica
Medtr6g061110 Medicago truncatula
Medtr6g061260 Medicago truncatula
Medtr8g013045 Medicago truncatula
Medtr8g013050 Medicago truncatula
MELO3C021052.2 Cucumis melo
MELO3C029160.2 Cucumis melo
Migut.D02493 Erythranthe guttata
MSTRG.18843 Avicennia marina
Nitab4.5_0000045g0340 Nicotiana tabacum
Nitab4.5_0000345g0090 Nicotiana tabacum
Nn2g14125 Nelumbo nucifera
Oeu018495.2 Olea europaea
Oeu035785.1 Olea europaea
Os11g0479232 Oryza sativa ssp. japonica
Peaxi162Scf00398g00089 Petunia axillaris
PGR083G2429 Punica granatum
PGSC0003DMG400023098 Solanum tuberosum
Phvul.010G020500 Phaseolus vulgaris
Potri.014G190600 Populus trichocarpa
Pp3c21_19350 Physcomitrium patens
Prupe.8G200800 Prunus persica
Psat4g199920 Pisum sativum
PSO339G3208 Papaver somniferum
PSO384G3368 Papaver somniferum
QL09p048654 Quercus lobata
QL09p052190 Quercus lobata
QL09p053053 Quercus lobata
QL09p053457 Quercus lobata
QL09p053462 Quercus lobata
RcHm_v2.0_Chr6g0284351 Rosa chinensis
Sabra14G0142400 Salix brachista
SalBow6G3716 Salvia bowleyana
Sc17g0002210 Simmondsia chinensis
Sed0004391 Sechium edule
Sed0011580 Sechium edule
Sed0023522 Sechium edule
SEGI_10192 Sequoiadendron giganteum
SEGI_29510 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38944 Striga asiatica
SHI23570 Sapria himalayana
SMO108G0001 Selaginella moellendorffii
SMO108G0003 Selaginella moellendorffii
SMO108G0004 Selaginella moellendorffii
SMO108G0005 Selaginella moellendorffii
SMO174G0204 Selaginella moellendorffii
SMO259G0021 Selaginella moellendorffii
SMO259G0024 Selaginella moellendorffii
SMO259G0028 Selaginella moellendorffii
SMO259G0038 Selaginella moellendorffii
Solyc09g059960.3 Solanum lycopersicum
Sopen09g023140 Solanum pennellii
Sp2g19120 Schrenkiella parvula
Sp3g06080 Schrenkiella parvula
TAR365G1079 Trochodendron aralioides
THA.LOC104802665 Tarenaya hassleriana
THA.LOC104818965 Tarenaya hassleriana
Thecc.01G222800 Theobroma cacao
Thhalv10020265m.g Eutrema salsugineum
TPR.G17133 Trifolium pratense
TPR.G17135 Trifolium pratense
TWI18G1080 Tripterygium wilfordii
TWI36G0473 Tripterygium wilfordii
unitig_899.g15019 Utricularia gibba
vmacro02772 Vaccinium macrocarpon
VMungo1309G1922 Vigna mungo
Zm00001eb184180 Zea mays
Zm00001eb269850 Zea mays

User provided reference genes

Program Settings