Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16480 Brassica napus
A10p08040 Brassica napus
Aa31LG2G18290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis
Actinidia32670 Actinidia chinensis
Ah.14g082380 Amaranthus hybridus
AL7G19480 Arabidopsis lyrata
Aqoxy1G00313 Aquilegia oxysepala
Aqoxy5G01302 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea
AT4G32360 Arabidopsis thaliana
ATR0315G096 Amborella trichopoda
Atru.chr7.1383 Acer truncatum
AUR62010945 Chenopodium quinoa
AUR62021458 Chenopodium quinoa
BcaB08g35458 Brassica carinata
BcaC04g20784 Brassica carinata
BolC3t14323H Brassica oleracea
BolC9t56804H Brassica oleracea
BraA03t10937Z Brassica rapa
BraSC35t45995Z Brassica rapa
C03p19370 Brassica napus
C09p39250 Brassica napus
CAN.G1379.35 Capsicum annuum
CARHR240270 Cardamine hirsuta
CARHR240280 Cardamine hirsuta
Carub.0007s0821 Capsella rubella
Ca_17323_v3 Cicer arietinum L.
CBR_g50003 Chara braunii
Cc01_g04910 Coffea canephora
CDE05G1289 Ceratophyllum demersum
CDE05G1414 Ceratophyllum demersum
CDE05G2817 Ceratophyllum demersum
Cfa003227 Carpinus fangiana
Cfa027289 Carpinus fangiana
Ciclev10008139m.g Citrus clementina
CiPaw.04G161700 Carya illinoinensis
ClCG05G003020 Citrullus lanatus
COL.COLO4_37106 Corchorus olitorius
Cpa.g.sc12.33 Carica papaya
Cpa.g.sc23.64 Carica papaya
Cre13.g562550 Chlamydomonas reinhardtii
CsaV3_3G010630 Cucumis sativus L.
CSS0046369 Camellia sinensis var. sinensis
DCAR_000508 Daucus carota
DCAR_009632 Daucus carota
Dinv36669 Davidia involucrata
Dinv41630 Davidia involucrata
Duzib150G0221 Durio zibethinus
Duzib168G1040 Durio zibethinus
ECA240G4205 Erigeron canadensis
EL10Ac8g18435 Beta vulgaris
Eucgr.C03804 Eucalyptus grandis
FAN19G2567 Fragaria x ananassa
FAN23G2083 Fragaria x ananassa
FAN26G2936 Fragaria x ananassa
FAN26G3268 Fragaria x ananassa
FAN28G0458 Fragaria x ananassa
FAN28G0981 Fragaria x ananassa
FvH4_1g05550 Fragaria vesca
FvH4_1g05551 Fragaria vesca
FvH4_1g05561 Fragaria vesca
FvH4_1g05581 Fragaria vesca
FvH4_1g05600 Fragaria vesca
Glyma.05G229400 Glycine max
Glyma.08G036802 Glycine max
Glyma.14G218300 Glycine max
Gohir.A07G004800 Gossypium hirsutum
Gohir.D07G007400 Gossypium hirsutum
Gorai.001G007100 Gossypium raimondii
GSVIVG01015352001 Vitis vinifera
HanXRQChr03g0061391 Helianthus annuus
Haze_25781 Corylus avellana
Haze_26375 Corylus avellana
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla
HPP92_003926 Vanilla planifolia
Hund09223 Selenicereus undatus
Lalb_Chr05g0223041 Lupinus albus
Lj4g0020985 Lotus japonicus
Lj7C657T3 Lonicera japonica
Lj7C657T4 Lonicera japonica
Lsat_1_v5_gn_7_41421 Lactuca sativa
Manes.14G158111 Manihot esculenta
Mapoly0125s0046 Marchantia polymorpha
MBI01_g28841_MAGBIO Magnolia biondii
MBI01_g29840_MAGBIO Magnolia biondii
MBI01_g38807_MAGBIO Magnolia biondii
MBI14_g17788_MAGBIO Magnolia biondii
MCO04G387 Micromonas commoda
MD02G1057100 Malus domestica
MD15G1191500 Malus domestica
MD15G1191600 Malus domestica
Medtr8g103060 Medicago truncatula
MELO3C006282.2 Cucumis melo
Migut.D01920 Erythranthe guttata
Nitab4.5_0000399g0090 Nicotiana tabacum
Nitab4.5_0004090g0040 Nicotiana tabacum
Nn2g11663 Nelumbo nucifera
Oeu026966.2 Olea europaea
Oeu035977.1 Olea europaea
Oeu035980.2 Olea europaea
Os02g0277600 Oryza sativa ssp. japonica
Peaxi162Scf00231g00512 Petunia axillaris
PGR102G2767 Punica granatum
PGSC0003DMG400018273 Solanum tuberosum
Phvul.002G311600 Phaseolus vulgaris
Potri.017G118801 Populus trichocarpa
Pp3c9_14820 Physcomitrium patens
PRCOL_00004495 Prasinoderma coloniale
Prupe.7G225700 Prunus persica
Psat7g014800 Pisum sativum
PSO210G2605 Papaver somniferum
PSO210G5559 Papaver somniferum
QL10p015858 Quercus lobata
RcHm_v2.0_Chr2g0091251 Rosa chinensis
Rhsim02G0216900 Rhododendron simsii
Rhsim03G0239600 Rhododendron simsii
Sabra17G0098100 Salix brachista
SalBow2G2764 Salvia bowleyana
Sc08g0007680 Simmondsia chinensis
Sed0003567 Sechium edule
SEGI_20206 Sequoiadendron giganteum
SEGI_24932 Sequoiadendron giganteum
SEGI_35536 Sequoiadendron giganteum
SEGI_37811 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12330 Striga asiatica
SGA_v2.0_scaffold58G20419 Striga asiatica
SGA_v2.0_scaffold7G04123 Striga asiatica
SHI02717 Sapria himalayana
SHI02718 Sapria himalayana
SMO361G0652 Selaginella moellendorffii
Solyc01g102490.3 Solanum lycopersicum
Sopen01g044930 Solanum pennellii
Sp7g30130 Schrenkiella parvula
TAR383G0565 Trochodendron aralioides
THA.LOC104799066 Tarenaya hassleriana
Thecc.09G106000 Theobroma cacao
Thhalv10013379m.g Eutrema salsugineum
TPR.G23489 Trifolium pratense
TWI60G0019 Tripterygium wilfordii
TWI81G0001 Tripterygium wilfordii
unitig_0.g799 Utricularia gibba
vmacro06232 Vaccinium macrocarpon
VMungo0251G3001 Vigna mungo
Zm00001eb203380 Zea mays
Zm00001eb203390 Zea mays
Zm00001eb203400 Zea mays

User provided reference genes

Program Settings