Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37520 Brassica napus
A04p05170 Brassica napus
A04p05210 Brassica napus
A09p47550 Brassica napus
A09p47560 Brassica napus
Aa31sc64G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1037 Anthoceros agrestis
Actinidia24932 Actinidia chinensis
Actinidia30711 Actinidia chinensis
Ah.11g050040 Amaranthus hybridus
Ah.11g050050 Amaranthus hybridus
AL5G35690 Arabidopsis lyrata
Aqoxy2G03504 Aquilegia oxysepala
Aqoxy5G00364 Aquilegia oxysepala
AT3G54610 Arabidopsis thaliana
ATR0665G603 Amborella trichopoda
Atru.chr5.1554 Acer truncatum
AUR62011952 Chenopodium quinoa
AUR62032265 Chenopodium quinoa
BcaB01g00175 Brassica carinata
BcaB02g08448 Brassica carinata
BcaC02g09052 Brassica carinata
BcaC02g09057 Brassica carinata
BcaC04g22409 Brassica carinata
BolC4t25361H Brassica oleracea
BolC4t25370H Brassica oleracea
BolC9t54871H Brassica oleracea
BraA04t16227Z Brassica rapa
BraA04t16230Z Brassica rapa
BraA09t40212Z Brassica rapa
C04p37870 Brassica napus
C04p37940 Brassica napus
C09p19690 Brassica napus
CARHR164510 Cardamine hirsuta
Carub.0005s2121 Capsella rubella
Ca_08641_v3 Cicer arietinum L.
CBR_g46433 Chara braunii
Cc01_g18890 Coffea canephora
CDE07G1918 Ceratophyllum demersum
Cfa002318 Carpinus fangiana
Cfa021827 Carpinus fangiana
Ciclev10019527m.g Citrus clementina
CiPaw.04G181200 Carya illinoinensis
ClCG01G025700 Citrullus lanatus
COL.COLO4_06089 Corchorus olitorius
Cpa.g.sc52.102 Carica papaya
Cre06.g256200 Chlamydomonas reinhardtii
CsaV3_6G052930 Cucumis sativus L.
CSS0023052 Camellia sinensis var. sinensis
CSS0028198 Camellia sinensis var. sinensis
CSS0043243 Camellia sinensis var. sinensis
DCAR_018443 Daucus carota
Dinv22487 Davidia involucrata
Dinv34561 Davidia involucrata
Duzib133G0403 Durio zibethinus
ECA247G2181 Erigeron canadensis
EL10Ac5g10465 Beta vulgaris
Eucgr.K03316 Eucalyptus grandis
Eucgr.K03317 Eucalyptus grandis
FAN07G0333 Fragaria x ananassa
FAN15G1010 Fragaria x ananassa
FAN20G1248 Fragaria x ananassa
FAN24G0661 Fragaria x ananassa
FAN24G2420 Fragaria x ananassa
FAN27G2477 Fragaria x ananassa
FvH4_2g22590 Fragaria vesca
FvH4_4g08670 Fragaria vesca
Glyma.03G158300 Glycine max
Glyma.19G160700 Glycine max
Gohir.A11G127000 Gossypium hirsutum
Gohir.D11G132200 Gossypium hirsutum
Gorai.007G141400 Gossypium raimondii
GSVIVG01000712001 Vitis vinifera
GSVIVG01000713001 Vitis vinifera
HanXRQChr10g0281481 Helianthus annuus
Haze_24523 Corylus avellana
Haze_26753 Corylus avellana
HPP92_024856 Vanilla planifolia
HPP92_026599 Vanilla planifolia
Hund09563 Selenicereus undatus
Lalb_Chr01g0019911 Lupinus albus
Lalb_Chr25g0290121 Lupinus albus
Lj1A57T46 Lonicera japonica
Lj1g0021498 Lotus japonicus
Lsat_1_v5_gn_2_63120 Lactuca sativa
Lsat_1_v5_gn_9_8160 Lactuca sativa
Manes.01G202300 Manihot esculenta
Manes.05G083800 Manihot esculenta
Mapoly0187s0003 Marchantia polymorpha
MBI04_g08415_MAGBIO Magnolia biondii
MCO07G152 Micromonas commoda
MD10G1193500 Malus domestica
Medtr7g096040 Medicago truncatula
Medtr8g062330 Medicago truncatula
MELO3C007015.2 Cucumis melo
Migut.N02179 Erythranthe guttata
MSTRG.17471 Avicennia marina
Nitab4.5_0000393g0090 Nicotiana tabacum
Nitab4.5_0000393g0110 Nicotiana tabacum
Nitab4.5_0004093g0010 Nicotiana tabacum
Nitab4.5_0004093g0020 Nicotiana tabacum
Nn1g02531 Nelumbo nucifera
Oeu018178.1 Olea europaea
Os10g0415900 Oryza sativa ssp. japonica
Peaxi162Scf01826g00011 Petunia axillaris
Peaxi162Scf01826g00015 Petunia axillaris
PGR044G0510 Punica granatum
Phvul.001G156000 Phaseolus vulgaris
Potri.002G045900 Populus trichocarpa
Potri.005G217400 Populus trichocarpa
Pp3c2_9560 Physcomitrium patens
PRCOL_00003272 Prasinoderma coloniale
Prupe.8G232900 Prunus persica
Psat3g061080 Pisum sativum
PSO210G1356 Papaver somniferum
PSO210G5903 Papaver somniferum
PSO461G0059 Papaver somniferum
PSO832G0444 Papaver somniferum
QL12p042617 Quercus lobata
RcHm_v2.0_Chr6g0289651 Rosa chinensis
Rhsim01G0270400 Rhododendron simsii
Rhsim13G0030500 Rhododendron simsii
Sabra02G0036800 Salix brachista
Sabra02G0036900 Salix brachista
Sabra05G0166600 Salix brachista
Sc05g0001060 Simmondsia chinensis
Sed0025057 Sechium edule
SEGI_32822 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25918 Striga asiatica
SHI09971 Sapria himalayana
SMO367G0544 Selaginella moellendorffii
Solyc10g045390.2 Solanum lycopersicum
Sopen10g015430 Solanum pennellii
Sp5g07850 Schrenkiella parvula
TAR365G0173 Trochodendron aralioides
THA.LOC104804692 Tarenaya hassleriana
Thecc.01G268500 Theobroma cacao
Thhalv10010247m.g Eutrema salsugineum
TPR.G19106 Trifolium pratense
TWI12G0479 Tripterygium wilfordii
TWI75G1122 Tripterygium wilfordii
unitig_22.g5954 Utricularia gibba
unitig_22.g5955 Utricularia gibba
vmacro02624 Vaccinium macrocarpon
vmacro14878 Vaccinium macrocarpon
vmacro14879 Vaccinium macrocarpon
VMungo1383G1961 Vigna mungo
Zm00001eb223040 Zea mays

User provided reference genes

Program Settings