Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p35450 Brassica napus
Aa31LG4G11790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis
Actinidia07770 Actinidia chinensis
AL2G28110 Arabidopsis lyrata
Aqoxy3G03731 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6TZ00L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea
AT1G69060 Arabidopsis thaliana
ATR0827G068 Amborella trichopoda
Atru.chr11.1578 Acer truncatum
AUR62003064 Chenopodium quinoa
AUR62007879 Chenopodium quinoa
BolC6t39355H Brassica oleracea
BraA07t31136Z Brassica rapa
C06p40780 Brassica napus
CAN.G1021.10 Capsicum annuum
CAN.G1021.18 Capsicum annuum
CAN.G1021.19 Capsicum annuum
CAN.G1021.20 Capsicum annuum
CAN.G1021.24 Capsicum annuum
CAN.G1021.3 Capsicum annuum
CANSAT11G1456 Cannabis sativa
CARHR061930 Cardamine hirsuta
CARHR061940 Cardamine hirsuta
Carub.0002s1568 Capsella rubella
Ca_05058_v3 Cicer arietinum L.
CBR_g19648 Chara braunii
Cc11_g11610 Coffea canephora
CDE10G0071 Ceratophyllum demersum
CDE10G0431 Ceratophyllum demersum
Cfa008851 Carpinus fangiana
Ciclev10030834m.g Citrus clementina
CiPaw.05G122400 Carya illinoinensis
CiPaw.06G094600 Carya illinoinensis
ClCG08G010560 Citrullus lanatus
COL.COLO4_27818 Corchorus olitorius
COL.COLO4_27836 Corchorus olitorius
Cpa.g.sc1.165 Carica papaya
CsaV3_6G033840 Cucumis sativus L.
CSS0000751 Camellia sinensis var. sinensis
DCAR_007205 Daucus carota
DCAR_023741 Daucus carota
DCAR_030054 Daucus carota
Dinv15585 Davidia involucrata
Dinv34024 Davidia involucrata
Duzib251G0840 Durio zibethinus
ECA234G0547 Erigeron canadensis
ECA246G3902 Erigeron canadensis
EL10Ac6g14684 Beta vulgaris
Eucgr.G02425 Eucalyptus grandis
FAN07G1705 Fragaria x ananassa
FAN12G1549 Fragaria x ananassa
FAN17G2893 Fragaria x ananassa
FAN22G1919 Fragaria x ananassa
FvH4_4g29350 Fragaria vesca
Glyma.01G064400 Glycine max
Glyma.02G122200 Glycine max
Gohir.A05G306900 Gossypium hirsutum
Gohir.D05G307200 Gossypium hirsutum
Gorai.009G327100 Gossypium raimondii
GSVIVG01012257001 Vitis vinifera
HanXRQChr16g0527171 Helianthus annuus
HanXRQChr17g0570091 Helianthus annuus
Haze_11871 Corylus avellana
HPP92_000883 Vanilla planifolia
Hund25158 Selenicereus undatus
Lalb_Chr10g0099121 Lupinus albus
Lalb_Chr17g0341431 Lupinus albus
Lj2g0019338 Lotus japonicus
Lj3A1027T86 Lonicera japonica
Lsat_1_v5_gn_3_106381 Lactuca sativa
Lsat_1_v5_gn_4_25561 Lactuca sativa
Manes.01G025000 Manihot esculenta
Manes.14G088800 Manihot esculenta
Mapoly0211s0012 Marchantia polymorpha
MBI16_g07040_MAGBIO Magnolia biondii
MD13G1056900 Malus domestica
MD16G1056300 Malus domestica
Medtr5g047140 Medicago truncatula
MELO3C011406.2 Cucumis melo
Migut.E00252 Erythranthe guttata
Nitab4.5_0000027g0180 Nicotiana tabacum
Nitab4.5_0012072g0010 Nicotiana tabacum
Nn3g17525 Nelumbo nucifera
Nn4g23527 Nelumbo nucifera
Oeu021807.1 Olea europaea
Oeu024162.6 Olea europaea
Oeu055079.1 Olea europaea
Oeu057419.1 Olea europaea
Os03g0752700 Oryza sativa ssp. japonica
Peaxi162Scf00188g01341 Petunia axillaris
PGR119G2532 Punica granatum
PGSC0003DMG400028304 Solanum tuberosum
PGSC0003DMG400028305 Solanum tuberosum
Phvul.003G038600 Phaseolus vulgaris
Potri.008G109100 Populus trichocarpa
Potri.010G139100 Populus trichocarpa
Potri.T155180 Populus trichocarpa
Pp3c1_680 Physcomitrium patens
Pp3c2_29040 Physcomitrium patens
Prupe.1G292900 Prunus persica
Psat2g093520 Pisum sativum
PSO017G3437 Papaver somniferum
PSO063G2731 Papaver somniferum
PSO478G2238 Papaver somniferum
PSO541G1879 Papaver somniferum
PSO782G3512 Papaver somniferum
QL05p008217 Quercus lobata
RcHm_v2.0_Chr4g0437421 Rosa chinensis
Rhsim09G0122700 Rhododendron simsii
Rhsim12G0071400 Rhododendron simsii
Sabra08G0082800 Salix brachista
Sabra10G0107300 Salix brachista
Sc04g0007390 Simmondsia chinensis
Sed0017498 Sechium edule
SEGI_37091 Sequoiadendron giganteum
SEGI_40784 Sequoiadendron giganteum
SGA_v2.0_scaffold287G47187 Striga asiatica
SMO361G0045 Selaginella moellendorffii
Solyc05g011930.4 Solanum lycopersicum
Solyc05g011950.3 Solanum lycopersicum
Solyc05g011960.4 Solanum lycopersicum
Sopen05g006670 Solanum pennellii
Sopen05g006690 Solanum pennellii
Sopen05g006700 Solanum pennellii
Sp5g24160 Schrenkiella parvula
TAR371G1032 Trochodendron aralioides
TAR371G1247 Trochodendron aralioides
TAR629G0517 Trochodendron aralioides
TAR726G0003 Trochodendron aralioides
THA.LOC104821992 Tarenaya hassleriana
Thecc.02G323700 Theobroma cacao
Thhalv10018302m.g Eutrema salsugineum
TPR.G34179 Trifolium pratense
TPR.G37754 Trifolium pratense
TPR.G38503 Trifolium pratense
TWI31G0262 Tripterygium wilfordii
TWI79G1206 Tripterygium wilfordii
unitig_62.g23700 Utricularia gibba
vmacro01299 Vaccinium macrocarpon
vmacro10479 Vaccinium macrocarpon
VMungo0720G2920 Vigna mungo
VMungo0771G0001 Vigna mungo
VMungo1215G3453 Vigna mungo
Zm00001eb057530 Zea mays
Zm00001eb214760 Zea mays

User provided reference genes

Program Settings