Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p27010 Brassica napus
Aa31LG7G9000 Aethionema arabicum
Actinidia04614 Actinidia chinensis
Actinidia04625 Actinidia chinensis
Actinidia13669 Actinidia chinensis
Actinidia38384 Actinidia chinensis
Ah.03g137830 Amaranthus hybridus
AL1G39800 Arabidopsis lyrata
Aqoxy3G03931 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HPX6PX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVU79Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P6ZXGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WF5P9Q Arachis hypogaea
AT1G25500 Arabidopsis thaliana
ATR0097G002 Amborella trichopoda
Atru.chr11.1329 Acer truncatum
AUR62002904 Chenopodium quinoa
AUR62035263 Chenopodium quinoa
BcaB03g12017 Brassica carinata
BcaB03g14048 Brassica carinata
BcaC01g01701 Brassica carinata
BcaC01g01716 Brassica carinata
BolC3t19586H Brassica oleracea
BraA08t34647Z Brassica rapa
C03p72880 Brassica napus
CAN.G656.42 Capsicum annuum
CANSAT64G1793 Cannabis sativa
CARHR025960 Cardamine hirsuta
Carub.0001s2498 Capsella rubella
Ca_11190_v3 Cicer arietinum L.
Ca_19113_v3 Cicer arietinum L.
CBR_g30194 Chara braunii
CBR_g546 Chara braunii
Cc00_g17470 Coffea canephora
CDE05G1095 Ceratophyllum demersum
Cfa018616 Carpinus fangiana
Ciclev10031322m.g Citrus clementina
CiPaw.15G004700 Carya illinoinensis
CiPaw.16G004100 Carya illinoinensis
ClCG05G022930 Citrullus lanatus
COL.COLO4_07886 Corchorus olitorius
Cpa.g.sc1.204 Carica papaya
Cpa.g.sc1.205 Carica papaya
CsaV3_5G034080 Cucumis sativus L.
CSS0010323 Camellia sinensis var. sinensis
CSS0021499 Camellia sinensis var. sinensis
CSS0024978 Camellia sinensis var. sinensis
CSS0031703 Camellia sinensis var. sinensis
CSS0041246 Camellia sinensis var. sinensis
CSS0041536 Camellia sinensis var. sinensis
CSS0042031 Camellia sinensis var. sinensis
CSS0044553 Camellia sinensis var. sinensis
CSS0047250 Camellia sinensis var. sinensis
DCAR_026721 Daucus carota
Dinv21116 Davidia involucrata
Duzib248G0180 Durio zibethinus
ECA234G2686 Erigeron canadensis
ECA246G3837 Erigeron canadensis
EL10Ac6g14461 Beta vulgaris
Eucgr.B03034 Eucalyptus grandis
FAN07G0299 Fragaria x ananassa
FAN12G2852 Fragaria x ananassa
FAN22G0537 Fragaria x ananassa
FvH4_4g27760 Fragaria vesca
Glyma.01G084500 Glycine max
Glyma.10G276200 Glycine max
Glyma.20G113500 Glycine max
Gohir.A12G169300 Gossypium hirsutum
Gohir.A13G053540 Gossypium hirsutum
Gohir.D12G172600 Gossypium hirsutum
Gohir.D13G070800 Gossypium hirsutum
Gorai.008G185100 Gossypium raimondii
Gorai.013G081000 Gossypium raimondii
GSVIVG01011930001 Vitis vinifera
HanXRQChr16g0529611 Helianthus annuus
HanXRQChr17g0552231 Helianthus annuus
Haze_17453 Corylus avellana
HPP92_006145 Vanilla planifolia
Hund25090 Selenicereus undatus
Lalb_Chr02g0146101 Lupinus albus
Lalb_Chr04g0254811 Lupinus albus
Lalb_Chr17g0341981 Lupinus albus
Lj2g0024967 Lotus japonicus
Lj5g0015640 Lotus japonicus
Lj6A762T40 Lonicera japonica
Lj6A763T35 Lonicera japonica
Lsat_1_v5_gn_3_59981 Lactuca sativa
Lsat_1_v5_gn_4_18881 Lactuca sativa
Manes.14G099000 Manihot esculenta
Mapoly0004s0207 Marchantia polymorpha
MBI13_g09687_MAGBIO Magnolia biondii
MD13G1044800 Malus domestica
MD16G1046200 Malus domestica
Medtr1g111330 Medicago truncatula
Medtr4g108910 Medicago truncatula
Medtr5g054780 Medicago truncatula
MELO3C012225.2 Cucumis melo
Migut.E00317 Erythranthe guttata
MSTRG.2252 Avicennia marina
Nitab4.5_0000672g0140 Nicotiana tabacum
Nitab4.5_0003642g0010 Nicotiana tabacum
Nn3g17775 Nelumbo nucifera
Oeu004599.1 Olea europaea
Oeu041892.2 Olea europaea
Oeu044386.2 Olea europaea
Os02g0580100 Oryza sativa ssp. japonica
Os09g0123400 Oryza sativa ssp. japonica
Peaxi162Scf00380g00811 Petunia axillaris
PGR102G0428 Punica granatum
PGSC0003DMG402012961 Solanum tuberosum
Phvul.003G028700 Phaseolus vulgaris
Phvul.007G025400 Phaseolus vulgaris
Potri.008G118200 Populus trichocarpa
Potri.010G128100 Populus trichocarpa
Prupe.1G307200 Prunus persica
Psat0s3850g0040 Pisum sativum
Psat2g101480 Pisum sativum
Psat4g141120 Pisum sativum
Psat6g196200 Pisum sativum
Psat6g229600 Pisum sativum
Psat7g191480 Pisum sativum
PSO063G0757 Papaver somniferum
PSO782G1090 Papaver somniferum
QL01p044542 Quercus lobata
RcHm_v2.0_Chr4g0435621 Rosa chinensis
Rhsim12G0082300 Rhododendron simsii
Sabra08G0089600 Salix brachista
Sabra10G0097300 Salix brachista
SalBow8G5398 Salvia bowleyana
Sc04g0004960 Simmondsia chinensis
Sed0015336 Sechium edule
SEGI_10382 Sequoiadendron giganteum
SMO165G0124 Selaginella moellendorffii
Solyc05g009670.3 Solanum lycopersicum
Sopen05g005490 Solanum pennellii
Sp1g22710 Schrenkiella parvula
TAR374G1139 Trochodendron aralioides
THA.LOC104808234 Tarenaya hassleriana
Thecc.02G359100 Theobroma cacao
Thhalv10007483m.g Eutrema salsugineum
TPR.G26307 Trifolium pratense
TPR.G38289 Trifolium pratense
TWI79G0027 Tripterygium wilfordii
unitig_699.g19492 Utricularia gibba
vmacro01369 Vaccinium macrocarpon
VMungo0720G2532 Vigna mungo
VMungo1215G1708 Vigna mungo
Zm00001eb245170 Zea mays

User provided reference genes

Program Settings