Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07680 Brassica napus
A03p59910 Brassica napus
Aa31LG2G20010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis
Actinidia33308 Actinidia chinensis
Actinidia38656 Actinidia chinensis
Ah.08g218880 Amaranthus hybridus
AL4G13970 Arabidopsis lyrata
AL7G21640 Arabidopsis lyrata
Aqoxy5G00990 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea
AT2G23940 Arabidopsis thaliana
AT4G30500 Arabidopsis thaliana
ATR0580G158 Amborella trichopoda
Atru.chr12.1707 Acer truncatum
Atru.chr12.1715 Acer truncatum
AUR62001168 Chenopodium quinoa
AUR62022155 Chenopodium quinoa
BcaB04g19089 Brassica carinata
BcaB08g34788 Brassica carinata
BcaC09g51840 Brassica carinata
BcaNung00560 Brassica carinata
BcaNung00561 Brassica carinata
BcaNung01743 Brassica carinata
BolC1t00831H Brassica oleracea
BolC1t00834H Brassica oleracea
BolC1t00837H Brassica oleracea
BolC7t46255H Brassica oleracea
BraA01t00711Z Brassica rapa
BraA03t15048Z Brassica rapa
C01p08550 Brassica napus
C07p57970 Brassica napus
CAN.G1190.6 Capsicum annuum
CANSAT11G2524 Cannabis sativa
CARHR184590 Cardamine hirsuta
CARHR184610 Cardamine hirsuta
CARHR238390 Cardamine hirsuta
Carub.0004s0310 Capsella rubella
Ca_21160_v3 Cicer arietinum L.
CBR_g3690 Chara braunii
Cc06_g14310 Coffea canephora
CDE05G2574 Ceratophyllum demersum
Ciclev10012924m.g Citrus clementina
CiPaw.06G050600 Carya illinoinensis
ClCG11G012690 Citrullus lanatus
COL.COLO4_10074 Corchorus olitorius
Cpa.g.sc743.3 Carica papaya
Cre02.g096850 Chlamydomonas reinhardtii
CsaV3_2G007780 Cucumis sativus L.
CSS0012616 Camellia sinensis var. sinensis
CSS0024126 Camellia sinensis var. sinensis
Dinv41325 Davidia involucrata
Duzib168G1565 Durio zibethinus
Duzib187G0728 Durio zibethinus
Duzib187G1655 Durio zibethinus
ECA234G3840 Erigeron canadensis
EL10Ac7g17961 Beta vulgaris
Eucgr.H00166 Eucalyptus grandis
FAN11G2096 Fragaria x ananassa
FAN21G1649 Fragaria x ananassa
FAN25G2017 Fragaria x ananassa
FvH4_3g25860 Fragaria vesca
Glyma.02G207700 Glycine max
Glyma.17G070000 Glycine max
Gohir.A08G087500 Gossypium hirsutum
Gohir.D08G098400 Gossypium hirsutum
Gorai.004G106100 Gossypium raimondii
GSVIVG01033204001 Vitis vinifera
HanXRQChr10g0307831 Helianthus annuus
Haze_21256 Corylus avellana
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla
HPP92_025776 Vanilla planifolia
Hund18050 Selenicereus undatus
Hund18463 Selenicereus undatus
Lalb_Chr07g0180011 Lupinus albus
Lj4g0007960 Lotus japonicus
Lj6g0018969 Lotus japonicus
Lj7A465G52 Lonicera japonica
Lsat_1_v5_gn_5_88201 Lactuca sativa
Manes.06G033000 Manihot esculenta
Mapoly0003s0226 Marchantia polymorpha
MBI14_g16418_MAGBIO Magnolia biondii
MCO15G043 Micromonas commoda
MD00G1059200 Malus domestica
MD00G1091200 Malus domestica
Medtr4g130180 Medicago truncatula
MELO3C004109.2 Cucumis melo
MELO3C010414.2 Cucumis melo
MELO3C020438.2 Cucumis melo
MELO3C029515.2 Cucumis melo
MELO3C032992.2 Cucumis melo
MELO3C033057.2 Cucumis melo
MELO3C033061.2 Cucumis melo
Migut.K00291 Erythranthe guttata
MSTRG.10716 Avicennia marina
Nitab4.5_0001036g0100 Nicotiana tabacum
Nitab4.5_0002545g0040 Nicotiana tabacum
Nn8g40193 Nelumbo nucifera
Oeu031856.2 Olea europaea
Oeu045637.1 Olea europaea
Os02g0666800 Oryza sativa ssp. japonica
Peaxi162Scf00038g00324 Petunia axillaris
PGR031G2537 Punica granatum
PGSC0003DMG400011218 Solanum tuberosum
Phvul.003G152700 Phaseolus vulgaris
Phvul.010G125500 Phaseolus vulgaris
Potri.018G101100 Populus trichocarpa
Pp3c11_17250 Physcomitrium patens
PRCOL_00004780 Prasinoderma coloniale
Prupe.1G100400 Prunus persica
Psat0s2826g0160 Pisum sativum
PSO017G4787 Papaver somniferum
PSO478G0084 Papaver somniferum
PSO675G4517 Papaver somniferum
QL01p011713 Quercus lobata
RcHm_v2.0_Chr4g0405231 Rosa chinensis
RcHm_v2.0_Chr5g0047191 Rosa chinensis
Rhsim03G0260500 Rhododendron simsii
Rhsim03G0260600 Rhododendron simsii
Rhsim03G0261000 Rhododendron simsii
Rhsim03G0261100 Rhododendron simsii
Sabra18G0087000 Salix brachista
SalBow1G8617 Salvia bowleyana
Sc05g0001840 Simmondsia chinensis
Sed0023066 Sechium edule
Sed0023985 Sechium edule
SGA_v2.0_scaffold12G06032 Striga asiatica
SMO164G0234 Selaginella moellendorffii
Solyc07g006150.3 Solanum lycopersicum
Sopen07g002260 Solanum pennellii
Sp4g02835 Schrenkiella parvula
Sp7g28380 Schrenkiella parvula
TAR636G0261 Trochodendron aralioides
THA.LOC104803530 Tarenaya hassleriana
THA.LOC104819960 Tarenaya hassleriana
Thecc.09G157500 Theobroma cacao
Thhalv10026393m.g Eutrema salsugineum
TPR.G1244 Trifolium pratense
TWI23G1034 Tripterygium wilfordii
TWI73G0469 Tripterygium wilfordii
unitig_62.g23488 Utricularia gibba
vmacro01000 Vaccinium macrocarpon
VMungo1215G0734 Vigna mungo
Zm00001eb186920 Zea mays

User provided reference genes

Program Settings