Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08140 Brassica napus
A03p59350 Brassica napus
A08p19470 Brassica napus
Aa31LG2G20590 Aethionema arabicum
Aa31LG8G16260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis
Actinidia01279 Actinidia chinensis
Ah.09g230060 Amaranthus hybridus
Ah.14g083530 Amaranthus hybridus
AL7G22280 Arabidopsis lyrata
Aqoxy377s001 Aquilegia oxysepala
Aqoxy7G02787 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea
AT4G29960 Arabidopsis thaliana
ATR0626G110 Amborella trichopoda
Atru.chr7.763 Acer truncatum
Atru.chr7.783 Acer truncatum
AUR62021347 Chenopodium quinoa
AUR62033261 Chenopodium quinoa
BcaB04g18770 Brassica carinata
BcaB06g26390 Brassica carinata
BcaB06g28011 Brassica carinata
BcaC01g01206 Brassica carinata
BcaC05g25672 Brassica carinata
BcaC07g37961 Brassica carinata
BcaC09g51764 Brassica carinata
BcaNung00506 Brassica carinata
BolC1t00902H Brassica oleracea
BolC3t21207H Brassica oleracea
BolC5t30251H Brassica oleracea
BolC5t32385H Brassica oleracea
BolC6t39910H Brassica oleracea
BraA01t00761Z Brassica rapa
BraA08t33909Z Brassica rapa
BraA10t43721Z Brassica rapa
C01p09110 Brassica napus
C03p88970 Brassica napus
C07p26820 Brassica napus
C07p57380 Brassica napus
CANSAT11G1104 Cannabis sativa
CARHR237880 Cardamine hirsuta
Carub.0007s1068 Capsella rubella
Ca_02102_v3 Cicer arietinum L.
CBR_g52634 Chara braunii
Cc00_g10760 Coffea canephora
CDE02G0552 Ceratophyllum demersum
CDE04G3679 Ceratophyllum demersum
Cfa013448 Carpinus fangiana
Ciclev10009010m.g Citrus clementina
CiPaw.07G196600 Carya illinoinensis
CiPaw.08G032800 Carya illinoinensis
ClCG06G013560 Citrullus lanatus
COL.COLO4_08419 Corchorus olitorius
Cpa.g.c27842.2 Carica papaya
CsaV3_1G031840 Cucumis sativus L.
CSS0012939 Camellia sinensis var. sinensis
DCAR_030818 Daucus carota
Dinv25437 Davidia involucrata
Dinv41171 Davidia involucrata
Duzib150G1033 Durio zibethinus
Duzib168G1982 Durio zibethinus
Duzib170G0048 Durio zibethinus
ECA073G0001 Erigeron canadensis
ECA240G3783 Erigeron canadensis
EL10Ac8g18332 Beta vulgaris
Eucgr.C00120 Eucalyptus grandis
FAN07G2409 Fragaria x ananassa
FAN12G1304 Fragaria x ananassa
FAN17G0071 Fragaria x ananassa
FAN22G0020 Fragaria x ananassa
FvH4_4g07340 Fragaria vesca
Glyma.09G059300 Glycine max
Glyma.15G165600 Glycine max
Gohir.A13G208700 Gossypium hirsutum
Gohir.D13G213100 Gossypium hirsutum
Gorai.013G243400 Gossypium raimondii
GSVIVG01010867001 Vitis vinifera
HanXRQChr13g0426591 Helianthus annuus
Haze_22015 Corylus avellana
HPP92_004703 Vanilla planifolia
Hund26310 Selenicereus undatus
Lalb_Chr11g0074801 Lupinus albus
Lalb_Chr13g0300031 Lupinus albus
Lj5A672T26 Lonicera japonica
Lj5C672T2 Lonicera japonica
Lj6g0016757 Lotus japonicus
Lsat_1_v5_gn_3_137280 Lactuca sativa
Manes.06G020200 Manihot esculenta
Mapoly0076s0086 Marchantia polymorpha
MBI13_g01742_MAGBIO Magnolia biondii
MBI13_g34035_MAGBIO Magnolia biondii
MBI19_g21652_MAGBIO Magnolia biondii
MD16G1249500 Malus domestica
Medtr2g037940 Medicago truncatula
MELO3C017433.2 Cucumis melo
Migut.J00802 Erythranthe guttata
Migut.L01885 Erythranthe guttata
MSTRG.26542 Avicennia marina
Nitab4.5_0000617g0020 Nicotiana tabacum
Nitab4.5_0008862g0020 Nicotiana tabacum
Nn2g14879 Nelumbo nucifera
Nn7g36649 Nelumbo nucifera
Oeu034799.1 Olea europaea
Oeu044675.2 Olea europaea
Os04g0606800 Oryza sativa ssp. japonica
Peaxi162Scf01600g00016 Petunia axillaris
PGR142G1735 Punica granatum
PGSC0003DMG400028729 Solanum tuberosum
Phvul.009G236500 Phaseolus vulgaris
Potri.006G075900 Populus trichocarpa
Potri.018G143000 Populus trichocarpa
Pp3c9_14880 Physcomitrium patens
Pp3c9_8340 Physcomitrium patens
Prupe.1G076300 Prunus persica
Psat1g145480 Pisum sativum
PSO063G5693 Papaver somniferum
PSO170G2568 Papaver somniferum
QL02p046501 Quercus lobata
RcHm_v2.0_Chr4g0399711 Rosa chinensis
Rhsim01G0118000 Rhododendron simsii
Sabra06G0056600 Salix brachista
Sabra18G0116800 Salix brachista
Sc16g0010440 Simmondsia chinensis
Sed0026503 Sechium edule
SEGI_23735 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12759 Striga asiatica
SHI09006 Sapria himalayana
SMO358G0278 Selaginella moellendorffii
Solyc07g008780.3 Solanum lycopersicum
Sopen07g004720 Solanum pennellii
Sp7g27770 Schrenkiella parvula
TAR383G0036 Trochodendron aralioides
TAR626G1810 Trochodendron aralioides
THA.LOC104803957 Tarenaya hassleriana
THA.LOC104803983 Tarenaya hassleriana
THA.LOC104814654 Tarenaya hassleriana
Thecc.09G185600 Theobroma cacao
Thhalv10025919m.g Eutrema salsugineum
TPR.G7936 Trifolium pratense
TWI32G0396 Tripterygium wilfordii
TWI34G0612 Tripterygium wilfordii
unitig_27.g24759 Utricularia gibba
unitig_699.g19404 Utricularia gibba
vmacro20818 Vaccinium macrocarpon
VMungo1309G1415 Vigna mungo
Zm00001eb071460 Zea mays
Zm00001eb430500 Zea mays

User provided reference genes

Program Settings