Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05480 Brassica napus
Aa31sc497G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4691 Anthoceros agrestis
Actinidia13335 Actinidia chinensis
Actinidia30277 Actinidia chinensis
Ah.16g105780 Amaranthus hybridus
AL7G18920 Arabidopsis lyrata
Aqoxy1G03410 Aquilegia oxysepala
Aqoxy1G03982 Aquilegia oxysepala
Aqoxy3G01962 Aquilegia oxysepala
Aqoxy3G01972 Aquilegia oxysepala
Aqoxy7G01483 Aquilegia oxysepala
Aqoxy7G01484 Aquilegia oxysepala
Aqoxy7G01485 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4KPL6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MD1Q75 Arachis hypogaea
AT4G32810 Arabidopsis thaliana
ATR0705G116 Amborella trichopoda
ATR0705G159 Amborella trichopoda
ATR0723G015 Amborella trichopoda
Atru.chr3.767 Acer truncatum
Atru.chr7.2090 Acer truncatum
AUR62009284 Chenopodium quinoa
AUR62039699 Chenopodium quinoa
AUR62044294 Chenopodium quinoa
BcaC09g52076 Brassica carinata
BcaC09g52077 Brassica carinata
BolC1t00567H Brassica oleracea
BolC1t00569H Brassica oleracea
BolC1t00601H Brassica oleracea
BraA01t00521Z Brassica rapa
C01p05890 Brassica napus
C01p06080 Brassica napus
CAN.G400.1 Capsicum annuum
CAN.G552.8 Capsicum annuum
CANSAT25G1983 Cannabis sativa
CARHR240800 Cardamine hirsuta
Carub.0007s0768 Capsella rubella
Ca_15593_v3 Cicer arietinum L.
Cc08_g09530 Coffea canephora
Cc08_g09540 Coffea canephora
CDE02G4197 Ceratophyllum demersum
CDE08G1231 Ceratophyllum demersum
Cfa013364 Carpinus fangiana
Ciclev10008050m.g Citrus clementina
Ciclev10010609m.g Citrus clementina
CiPaw.07G204400 Carya illinoinensis
CiPaw.08G025700 Carya illinoinensis
ClCG08G012240 Citrullus lanatus
COL.COLO4_20969 Corchorus olitorius
Cpa.g.c24654.3 Carica papaya
Cpa.g.c24654.4 Carica papaya
Cre02.g073900 Chlamydomonas reinhardtii
Cre02.g073950 Chlamydomonas reinhardtii
Cre08.g365851 Chlamydomonas reinhardtii
CsaV3_2G030870 Cucumis sativus L.
CSS0030796 Camellia sinensis var. sinensis
DCAR_004470 Daucus carota
Dinv23368 Davidia involucrata
Dinv27900 Davidia involucrata
Duzib168G0183 Durio zibethinus
ECA233G5490 Erigeron canadensis
ECA248G1215 Erigeron canadensis
ECA248G1482 Erigeron canadensis
EL10Ac2g04019 Beta vulgaris
Eucgr.C02930 Eucalyptus grandis
Eucgr.C02932 Eucalyptus grandis
FAN15G3195 Fragaria x ananassa
FAN20G3026 Fragaria x ananassa
FAN27G2638 Fragaria x ananassa
FvH4_2g35610 Fragaria vesca
Glyma.04G084100 Glycine max
Glyma.06G085800 Glycine max
Gohir.A06G092800 Gossypium hirsutum
Gohir.A07G022500 Gossypium hirsutum
Gohir.D06G092400 Gossypium hirsutum
Gohir.D07G025900 Gossypium hirsutum
Gorai.001G027000 Gossypium raimondii
Gorai.010G106400 Gossypium raimondii
GSVIVG01035626001 Vitis vinifera
HanXRQChr00c0025g0571121 Helianthus annuus
HanXRQChr02g0050571 Helianthus annuus
Haze_21886 Corylus avellana
HPP92_022983 Vanilla planifolia
Lalb_Chr08g0243061 Lupinus albus
Lj1g0019414 Lotus japonicus
Lj7A701T19 Lonicera japonica
Lj8A581T28 Lonicera japonica
Lsat_1_v5_gn_1_46661 Lactuca sativa
Lsat_1_v5_gn_6_23181 Lactuca sativa
Manes.16G075700 Manihot esculenta
MBI04_g45212_MAGBIO Magnolia biondii
MCO01G787 Micromonas commoda
MD08G1113800 Malus domestica
MD15G1093500 Malus domestica
Medtr3g109610 Medicago truncatula
Medtr7g063800 Medicago truncatula
MELO3C011142.2 Cucumis melo
Migut.A00205 Erythranthe guttata
Nitab4.5_0001894g0040 Nicotiana tabacum
Nitab4.5_0003794g0080 Nicotiana tabacum
Nn8g39130 Nelumbo nucifera
Oeu030720.1 Olea europaea
Oeu038805.1 Olea europaea
Os01g0566500 Oryza sativa ssp. japonica
Os01g0746400 Oryza sativa ssp. japonica
Peaxi162Scf00227g00714 Petunia axillaris
PGR044G2243 Punica granatum
PGSC0003DMG400002234 Solanum tuberosum
Phvul.009G109700 Phaseolus vulgaris
Potri.006G238500 Populus trichocarpa
Potri.018G044100 Populus trichocarpa
Pp3c6_21520 Physcomitrium patens
PRCOL_00003714 Prasinoderma coloniale
Prupe.1G448400 Prunus persica
Psat0s1928g0120 Pisum sativum
PSO210G1252 Papaver somniferum
QL12p041392 Quercus lobata
RcHm_v2.0_Chr6g0306201 Rosa chinensis
Rhsim02G0178400 Rhododendron simsii
Sabra06G0186600 Salix brachista
SalBow4G2697 Salvia bowleyana
Sc09g0009280 Simmondsia chinensis
Sed0014536 Sechium edule
SEGI_00216 Sequoiadendron giganteum
SEGI_19583 Sequoiadendron giganteum
SEGI_19892 Sequoiadendron giganteum
SEGI_33998 Sequoiadendron giganteum
SEGI_36004 Sequoiadendron giganteum
SEGI_37641 Sequoiadendron giganteum
SEGI_39055 Sequoiadendron giganteum
SEGI_39574 Sequoiadendron giganteum
SGA_v2.0_scaffold103G29990 Striga asiatica
SMO147G0156 Selaginella moellendorffii
Solyc08g066650.3 Solanum lycopersicum
Sopen08g020520 Solanum pennellii
Sp7g30580 Schrenkiella parvula
TAR624G0014 Trochodendron aralioides
THA.LOC104820078 Tarenaya hassleriana
Thecc.09G045100 Theobroma cacao
Thhalv10024788m.g Eutrema salsugineum
TPR.G15106 Trifolium pratense
TWI34G1114 Tripterygium wilfordii
TWI63G0812 Tripterygium wilfordii
unitig_46.g18188 Utricularia gibba
vmacro11059 Vaccinium macrocarpon
VMungo1309G1842 Vigna mungo
Zm00001eb153000 Zea mays

User provided reference genes

Program Settings