Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20310 Brassica napus
Aa31LG5G9530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2412 Anthoceros agrestis
Ah.07g205360 Amaranthus hybridus
AL5G21960 Arabidopsis lyrata
Aqoxy4G00037 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JR430F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4799Z Arachis hypogaea
AT2G26270 Arabidopsis thaliana
AT3G43930 Arabidopsis thaliana
ATR0053G014 Amborella trichopoda
ATR0053G058 Amborella trichopoda
Atru.chr7.1825 Acer truncatum
AUR62020277 Chenopodium quinoa
AUR62020278 Chenopodium quinoa
AUR62037727 Chenopodium quinoa
AUR62037728 Chenopodium quinoa
BcaB06g28091 Brassica carinata
BcaB08g35274 Brassica carinata
BcaC02g08288 Brassica carinata
BolC4t27134H Brassica oleracea
BraA04t17610Z Brassica rapa
C04p56010 Brassica napus
CAN.G348.11 Capsicum annuum
CARHR115110 Cardamine hirsuta
Carub.0004s0613 Capsella rubella
Carub.0004s0614 Capsella rubella
Carub.0005s0971 Capsella rubella
Ca_15807_v3 Cicer arietinum L.
CBR_g17947 Chara braunii
CBR_g899 Chara braunii
Cc08_g06760 Coffea canephora
CDE07G0506 Ceratophyllum demersum
Ciclev10007934m.g Citrus clementina
CiPaw.05G156800 Carya illinoinensis
CiPaw.05G157300 Carya illinoinensis
CiPaw.15G090700 Carya illinoinensis
ClCG08G009730 Citrullus lanatus
COL.COLO4_21162 Corchorus olitorius
Cpa.g.sc82.16 Carica papaya
Cpa.g.sc82.17 Carica papaya
Cre10.g440500 Chlamydomonas reinhardtii
CsaV3_6G031850 Cucumis sativus L.
CSS0015942 Camellia sinensis var. sinensis
DCAR_001244 Daucus carota
Dinv41847 Davidia involucrata
Duzib150G0504 Durio zibethinus
Duzib168G0917 Durio zibethinus
ECA236G2474 Erigeron canadensis
ECA240G2599 Erigeron canadensis
EL10Ac2g02404 Beta vulgaris
Eucgr.C00744 Eucalyptus grandis
FAN15G2531 Fragaria x ananassa
FAN20G2081 Fragaria x ananassa
FAN27G2149 Fragaria x ananassa
FvH4_2g36960 Fragaria vesca
Glyma.04G057500 Glycine max
Glyma.06G058100 Glycine max
Gohir.A01G114950 Gossypium hirsutum
Gohir.A01G201250 Gossypium hirsutum
Gohir.A05G037800 Gossypium hirsutum
Gohir.A07G018700 Gossypium hirsutum
Gohir.A08G247100 Gossypium hirsutum
Gohir.D05G039300 Gossypium hirsutum
Gohir.D07G018500 Gossypium hirsutum
Gohir.D07G161533 Gossypium hirsutum
Gohir.D07G167350 Gossypium hirsutum
Gohir.D08G268300 Gossypium hirsutum
Gorai.001G019200 Gossypium raimondii
Gorai.003G122400 Gossypium raimondii
Gorai.004G286000 Gossypium raimondii
Gorai.009G039800 Gossypium raimondii
GSVIVG01035495001 Vitis vinifera
GSVIVG01035496001 Vitis vinifera
HanXRQChr03g0067181 Helianthus annuus
HanXRQChr05g0136401 Helianthus annuus
Haze_18325 Corylus avellana
HPP92_013024 Vanilla planifolia
Lalb_Chr08g0244691 Lupinus albus
Lalb_Chr23g0268051 Lupinus albus
Lj1g0011589 Lotus japonicus
Lj7C207G3 Lonicera japonica
Lsat_1_v5_gn_7_59161 Lactuca sativa
Lsat_1_v5_gn_8_70380 Lactuca sativa
Manes.03G056600 Manihot esculenta
Manes.16G087100 Manihot esculenta
MBI19_g09934_MAGBIO Magnolia biondii
MD08G1046400 Malus domestica
MD15G1047400 Malus domestica
Medtr3g105400 Medicago truncatula
MELO3C011496.2 Cucumis melo
Migut.A00327 Erythranthe guttata
MSTRG.11771 Avicennia marina
MSTRG.25847 Avicennia marina
Nitab4.5_0000508g0040 Nicotiana tabacum
Nitab4.5_0004346g0050 Nicotiana tabacum
Nn8g38600 Nelumbo nucifera
Oeu030211.1 Olea europaea
Oeu045334.2 Olea europaea
Os09g0440200 Oryza sativa ssp. japonica
Peaxi162Scf00922g00210 Petunia axillaris
PGR142G1044 Punica granatum
PGSC0003DMG400007379 Solanum tuberosum
Phvul.009G083900 Phaseolus vulgaris
Potri.006G218800 Populus trichocarpa
Pp3c3_23860 Physcomitrium patens
Pp3c6_19110 Physcomitrium patens
Prupe.1G401800 Prunus persica
Psat5g034920 Pisum sativum
PSO198G0133 Papaver somniferum
PSO401G0002 Papaver somniferum
PSO724G1181 Papaver somniferum
PSO789G0001 Papaver somniferum
QL02p017308 Quercus lobata
RcHm_v2.0_Chr6g0304801 Rosa chinensis
Rhsim06G0092200 Rhododendron simsii
Rhsim06G0128300 Rhododendron simsii
Sabra06G0168600 Salix brachista
SalBow4G3344 Salvia bowleyana
Sc23g0006070 Simmondsia chinensis
Sed0007384 Sechium edule
SEGI_27832 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36313 Striga asiatica
SHI08483 Sapria himalayana
SHI28014 Sapria himalayana
SHI28016 Sapria himalayana
SMO169G0310 Selaginella moellendorffii
SMO336G0001 Selaginella moellendorffii
Solyc08g067240.4 Solanum lycopersicum
Sopen08g021170 Solanum pennellii
Sp4g06550 Schrenkiella parvula
TAR624G0706 Trochodendron aralioides
THA.LOC104810953 Tarenaya hassleriana
THA.LOC104819895 Tarenaya hassleriana
Thecc.09G065700 Theobroma cacao
Thhalv10001999m.g Eutrema salsugineum
Thhalv10011063m.g Eutrema salsugineum
TPR.G26129 Trifolium pratense
TPR.G26130 Trifolium pratense
TPR.G31221 Trifolium pratense
TPR.G3563 Trifolium pratense
TWI34G1336 Tripterygium wilfordii
TWI63G0562 Tripterygium wilfordii
unitig_46.g18534 Utricularia gibba
unitig_46.g18535 Utricularia gibba
vmacro21130 Vaccinium macrocarpon
VMungo1309G0309 Vigna mungo
Zm00001eb314080 Zea mays

User provided reference genes

Program Settings