Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19400 Brassica napus
A06p02280 Brassica napus
A08p02530 Brassica napus
Aa31csc1849G10 Aethionema arabicum
Aa31LG10G3080 Aethionema arabicum
Aa31LG1G17240 Aethionema arabicum
Actinidia21740 Actinidia chinensis
Actinidia32130 Actinidia chinensis
Ah.01g004460 Amaranthus hybridus
Ah.01g016970 Amaranthus hybridus
AL1G59670 Arabidopsis lyrata
Aqoxy2G03852 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TCAK26 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK2LT4 Arachis hypogaea
AT1G51730 Arabidopsis thaliana
ATR0789G068 Amborella trichopoda
Atru.chr1.3630 Acer truncatum
Atru.chr1.3634 Acer truncatum
AUR62023908 Chenopodium quinoa
AUR62038338 Chenopodium quinoa
BcaB02g11274 Brassica carinata
BcaB07g33629 Brassica carinata
BcaC01g01293 Brassica carinata
BcaC08g43934 Brassica carinata
BolC3t21350H Brassica oleracea
BolC6t36489H Brassica oleracea
BraA05t20844Z Brassica rapa
BraA08t32293Z Brassica rapa
C03p90280 Brassica napus
C06p13290 Brassica napus
CAN.G1668.3 Capsicum annuum
CANSAT56G3588 Cannabis sativa
CARHR041890 Cardamine hirsuta
Carub.0001s4060 Capsella rubella
Ca_23294_v3 Cicer arietinum L.
CBR_g78883 Chara braunii
Cc04_g02270 Coffea canephora
CDE05G2485 Ceratophyllum demersum
Cfa003607 Carpinus fangiana
Cfa022882 Carpinus fangiana
Ciclev10026315m.g Citrus clementina
CiPaw.01G227300 Carya illinoinensis
ClCG09G000540 Citrullus lanatus
COL.COLO4_30606 Corchorus olitorius
Cpa.g.sc663.1 Carica papaya
Cre03.g201776 Chlamydomonas reinhardtii
CsaV3_7G034910 Cucumis sativus L.
CSS0004179 Camellia sinensis var. sinensis
CSS0006284 Camellia sinensis var. sinensis
CSS0030454 Camellia sinensis var. sinensis
DCAR_026373 Daucus carota
Dinv30400 Davidia involucrata
Dinv37934 Davidia involucrata
Duzib192G1032 Durio zibethinus
Duzib235G0510 Durio zibethinus
ECA234G0069 Erigeron canadensis
ECA247G1989 Erigeron canadensis
EL10Ac9g21132 Beta vulgaris
Eucgr.F03103 Eucalyptus grandis
FAN02G2875 Fragaria x ananassa
FAN05G4929 Fragaria x ananassa
FAN09G3568 Fragaria x ananassa
FAN14G3976 Fragaria x ananassa
FvH4_6g32940 Fragaria vesca
Glyma.07G012600 Glycine max
Glyma.08G196300 Glycine max
Gohir.A02G116100 Gossypium hirsutum
Gohir.A05G133633 Gossypium hirsutum
Gohir.D03G057100 Gossypium hirsutum
Gohir.D05G135550 Gossypium hirsutum
Gorai.003G060200 Gossypium raimondii
Gorai.009G139400 Gossypium raimondii
GSVIVG01016892001 Vitis vinifera
HanXRQChr04g0095781 Helianthus annuus
HanXRQChr12g0360701 Helianthus annuus
Haze_15918 Corylus avellana
Hma1.2p1_0679F.1_g202280 Hydrangea macrophylla
Hma1.2p1_0679F.1_g202290 Hydrangea macrophylla
HPP92_023230 Vanilla planifolia
Lalb_Chr01g0013321 Lupinus albus
Lalb_Chr04g0263111 Lupinus albus
Lj3g0014772 Lotus japonicus
Lj5C49T18 Lonicera japonica
Lj9A517T55 Lonicera japonica
Lsat_1_v5_gn_1_36441 Lactuca sativa
Lsat_1_v5_gn_5_133981 Lactuca sativa
Manes.04G137400 Manihot esculenta
Mapoly0076s0035 Marchantia polymorpha
MBI01_g27633_MAGBIO Magnolia biondii
MCO07G323 Micromonas commoda
MD09G1196300 Malus domestica
MD17G1177100 Malus domestica
Medtr8g015590 Medicago truncatula
MELO3C024403.2 Cucumis melo
Migut.I00995 Erythranthe guttata
Migut.I01159 Erythranthe guttata
MSTRG.22609 Avicennia marina
Nitab4.5_0004848g0030 Nicotiana tabacum
Nitab4.5_0006071g0010 Nicotiana tabacum
Nn8g38928 Nelumbo nucifera
Oeu026734.1 Olea europaea
Oeu052817.1 Olea europaea
Oeu052818.1 Olea europaea
Os01g0558300 Oryza sativa ssp. japonica
Peaxi162Scf00038g01246 Petunia axillaris
PGR102G3241 Punica granatum
PGSC0003DMG401002511 Solanum tuberosum
Phvul.010G142100 Phaseolus vulgaris
Potri.001G193700 Populus trichocarpa
Potri.001G199500 Populus trichocarpa
Pp3c27_5930 Physcomitrium patens
Pp3c5_13990 Physcomitrium patens
Pp3c6_13820 Physcomitrium patens
PRCOL_00005001 Prasinoderma coloniale
Prupe.3G052700 Prunus persica
Psat4g194480 Pisum sativum
PSO135G0227 Papaver somniferum
PSO170G1437 Papaver somniferum
PSO210G2569 Papaver somniferum
PSO675G1433 Papaver somniferum
PSO782G0965 Papaver somniferum
QL05p015800 Quercus lobata
RcHm_v2.0_Chr2g0142451 Rosa chinensis
Rhsim08G0231100 Rhododendron simsii
SalBow6G5092 Salvia bowleyana
Sc12g0009900 Simmondsia chinensis
Sed0003007 Sechium edule
SEGI_04320 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16987 Striga asiatica
SGA_v2.0_scaffold71G23756 Striga asiatica
SMO300G0020 Selaginella moellendorffii
Solyc03g121310.2 Solanum lycopersicum
Sopen03g040120 Solanum pennellii
Sp1g38370 Schrenkiella parvula
TAR383G0476 Trochodendron aralioides
TAR497G0002 Trochodendron aralioides
TAR624G0026 Trochodendron aralioides
THA.LOC104817935 Tarenaya hassleriana
Thecc.06G107700 Theobroma cacao
Thhalv10011475m.g Eutrema salsugineum
TPR.G8766 Trifolium pratense
TWI31G0253 Tripterygium wilfordii
TWI79G0337 Tripterygium wilfordii
unitig_0.g2868 Utricularia gibba
vmacro18822 Vaccinium macrocarpon
VMungo0331G1330 Vigna mungo
Zm00001eb162290 Zea mays
Zm00001eb356680 Zea mays

User provided reference genes

Program Settings