Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32770 Brassica napus
Aa31LG1G21920 Aethionema arabicum
Aa31LG3G2190 Aethionema arabicum
Aa31LG4G10620 Aethionema arabicum
Aa31sc27G120 Aethionema arabicum
Actinidia19688 Actinidia chinensis
Ah.15g092230 Amaranthus hybridus
AL6G12440 Arabidopsis lyrata
Aqoxy4G03250 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BXCF5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0ZPTX Arachis hypogaea
AT5G03160 Arabidopsis thaliana
ATR0314G006 Amborella trichopoda
ATR0314G017 Amborella trichopoda
ATR0314G021 Amborella trichopoda
Atru.chr8.1881 Acer truncatum
AUR62040051 Chenopodium quinoa
AUR62043149 Chenopodium quinoa
BcaB02g11526 Brassica carinata
BcaC06g32036 Brassica carinata
BolC9t60094H Brassica oleracea
BraA10t45311Z Brassica rapa
C09p73640 Brassica napus
CAN.G888.19 Capsicum annuum
CANSAT80G2737 Cannabis sativa
CARHR084180 Cardamine hirsuta
CARHR210200 Cardamine hirsuta
Carub.0006s0195 Capsella rubella
Ca_08838_v3 Cicer arietinum L.
CBR_g32064 Chara braunii
Cc06_g03820 Coffea canephora
CDE02G1038 Ceratophyllum demersum
Cfa017534 Carpinus fangiana
Cfa022798 Carpinus fangiana
Ciclev10011610m.g Citrus clementina
CiPaw.09G177600 Carya illinoinensis
ClCG04G008930 Citrullus lanatus
COL.COLO4_27042 Corchorus olitorius
Cpa.g.sc45.60 Carica papaya
Cre01.g032500 Chlamydomonas reinhardtii
Cre06.g279550 Chlamydomonas reinhardtii
Cre09.g389245 Chlamydomonas reinhardtii
CsaV3_6G039440 Cucumis sativus L.
CSS0006107 Camellia sinensis var. sinensis
CSS0012228 Camellia sinensis var. sinensis
CSS0031764 Camellia sinensis var. sinensis
CSS0037236 Camellia sinensis var. sinensis
DCAR_009276 Daucus carota
DCAR_020841 Daucus carota
Dinv35745 Davidia involucrata
Dinv37275 Davidia involucrata
Duzib093G0219 Durio zibethinus
Duzib106G1740 Durio zibethinus
Duzib128G0881 Durio zibethinus
ECA238G1048 Erigeron canadensis
EL10Ac7g16537 Beta vulgaris
Eucgr.K03238 Eucalyptus grandis
FAN02G2869 Fragaria x ananassa
FAN05G4704 Fragaria x ananassa
FAN09G2426 Fragaria x ananassa
FAN14G4454 Fragaria x ananassa
FvH4_6g15690 Fragaria vesca
Glyma.03G179800 Glycine max
Glyma.19G180600 Glycine max
Gohir.A01G215700 Gossypium hirsutum
Gohir.A09G150600 Gossypium hirsutum
Gohir.D01G204500 Gossypium hirsutum
Gohir.D09G146300 Gossypium hirsutum
Gorai.002G248700 Gossypium raimondii
Gorai.006G167500 Gossypium raimondii
GSVIVG01025659001 Vitis vinifera
HanXRQChr07g0195601 Helianthus annuus
Haze_20614 Corylus avellana
Hma1.2p1_0614F.1_g189520 Hydrangea macrophylla
HPP92_025091 Vanilla planifolia
Hund20209 Selenicereus undatus
Lalb_Chr01g0018931 Lupinus albus
Lalb_Chr20g0112801 Lupinus albus
Lalb_Chr25g0289171 Lupinus albus
Lj1g0002210 Lotus japonicus
Lj2A111T58 Lonicera japonica
Lsat_1_v5_gn_2_108740 Lactuca sativa
Manes.08G005800 Manihot esculenta
Manes.09G069500 Manihot esculenta
Mapoly0115s0071 Marchantia polymorpha
MBI05_g35615_MAGBIO Magnolia biondii
MBI05_g35617_MAGBIO Magnolia biondii
MCO02G130 Micromonas commoda
MCO03G546 Micromonas commoda
MCO05G624 Micromonas commoda
MCO11G495 Micromonas commoda
MCO12G435 Micromonas commoda
MCO13G339 Micromonas commoda
MD04G1100100 Malus domestica
MD12G1120200 Malus domestica
Medtr7g101070 Medicago truncatula
MELO3C014249.2 Cucumis melo
Migut.L01677 Erythranthe guttata
MSTRG.26712 Avicennia marina
Nitab4.5_0000101g0010 Nicotiana tabacum
Nitab4.5_0005150g0050 Nicotiana tabacum
Nn2g13067 Nelumbo nucifera
Oeu014965.1 Olea europaea
Oeu059978.1 Olea europaea
Os01g0977200 Oryza sativa ssp. japonica
Os02g0195300 Oryza sativa ssp. japonica
Peaxi162Scf00182g00120 Petunia axillaris
PGR142G0484 Punica granatum
PGSC0003DMG400001752 Solanum tuberosum
Phvul.001G176300 Phaseolus vulgaris
Potri.016G088600 Populus trichocarpa
Pp3c2_9790 Physcomitrium patens
PRCOL_00004334 Prasinoderma coloniale
Prupe.6G238400 Prunus persica
Psat3g044040 Pisum sativum
PSO063G2699 Papaver somniferum
PSO339G5285 Papaver somniferum
PSO478G2940 Papaver somniferum
QL07p044722 Quercus lobata
RcHm_v2.0_Chr3g0469391 Rosa chinensis
Rhsim05G0182800 Rhododendron simsii
Sabra16G0094100 Salix brachista
SalBow5G1413 Salvia bowleyana
SalBow5G2506 Salvia bowleyana
SalBow5G4712 Salvia bowleyana
SalBow5G5390 Salvia bowleyana
Sc20g0005180 Simmondsia chinensis
Sed0004997 Sechium edule
Sed0021094 Sechium edule
SEGI_03688 Sequoiadendron giganteum
SGA_v2.0_scaffold452G51844 Striga asiatica
SHI12530 Sapria himalayana
SMO118G0210 Selaginella moellendorffii
Solyc08g067120.3 Solanum lycopersicum
Solyc09g007630.3 Solanum lycopersicum
Sopen09g002500 Solanum pennellii
Sp6g39560 Schrenkiella parvula
TAR623G0402 Trochodendron aralioides
TAR636G2418 Trochodendron aralioides
THA.LOC104816331 Tarenaya hassleriana
Thecc.05G057500 Theobroma cacao
Thhalv10013408m.g Eutrema salsugineum
TPR.G18270 Trifolium pratense
TWI53G1318 Tripterygium wilfordii
TWI74G0245 Tripterygium wilfordii
unitig_0.g690 Utricularia gibba
vmacro20042 Vaccinium macrocarpon
VMungo1383G1126 Vigna mungo
Zm00001eb362030 Zea mays

User provided reference genes

Program Settings