Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p52560 Brassica napus
A03p52570 Brassica napus
A08p15390 Brassica napus
Aa31LG6G3020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.296 Anthoceros agrestis
Actinidia10021 Actinidia chinensis
Actinidia20915 Actinidia chinensis
Ah.05g180680 Amaranthus hybridus
Ah.09g225570 Amaranthus hybridus
AL7G33190 Arabidopsis lyrata
Aqoxy3G02565 Aquilegia oxysepala
Aqoxy7G00336 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23H0YW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.99Z3M1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3VGT8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7E1K8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MH5UBF Arachis hypogaea
AT4G20960 Arabidopsis thaliana
ATR0680G350 Amborella trichopoda
Atru.chr5.463 Acer truncatum
AUR62004345 Chenopodium quinoa
AUR62022551 Chenopodium quinoa
BcaB03g11707 Brassica carinata
BcaB06g27372 Brassica carinata
BcaC01g00726 Brassica carinata
BcaC01g00732 Brassica carinata
BcaNung05412 Brassica carinata
BcaNung05416 Brassica carinata
BolC3t20645H Brassica oleracea
BolC7t45602H Brassica oleracea
BraA03t14331Z Brassica rapa
BraA08t33517Z Brassica rapa
C03p83660 Brassica napus
C07p51010 Brassica napus
CAN.G78.54 Capsicum annuum
CANSAT21G0157 Cannabis sativa
CARHR227510 Cardamine hirsuta
Carub.0007s2048 Capsella rubella
CBR_g12386 Chara braunii
Cc02_g37880 Coffea canephora
Cfa003937 Carpinus fangiana
Ciclev10013015m.g Citrus clementina
Ciclev10020258m.g Citrus clementina
CiPaw.01G060000 Carya illinoinensis
ClCG06G003790 Citrullus lanatus
COL.COLO4_12702 Corchorus olitorius
Cpa.g.c27491.2 Carica papaya
Cre12.g555951 Chlamydomonas reinhardtii
CsaV3_6G000480 Cucumis sativus L.
CSS0001208 Camellia sinensis var. sinensis
CSS0029232 Camellia sinensis var. sinensis
DCAR_006924 Daucus carota
Dinv32470 Davidia involucrata
Duzib138G0257 Durio zibethinus
Duzib268G0644 Durio zibethinus
ECA234G3587 Erigeron canadensis
EL10Ac1g00427 Beta vulgaris
Eucgr.D00187 Eucalyptus grandis
Eucgr.D02284 Eucalyptus grandis
FAN01G2345 Fragaria x ananassa
FAN03G2591 Fragaria x ananassa
FAN03G3310 Fragaria x ananassa
FAN03G3376 Fragaria x ananassa
FAN06G0276 Fragaria x ananassa
FAN10G3940 Fragaria x ananassa
FAN19G0035 Fragaria x ananassa
FAN26G0391 Fragaria x ananassa
FAN28G0697 Fragaria x ananassa
FvH4_1g22161 Fragaria vesca
FvH4_7g08470 Fragaria vesca
Glyma.03G010700 Glycine max
Glyma.07G071800 Glycine max
Gohir.A08G032600 Gossypium hirsutum
Gohir.D08G043500 Gossypium hirsutum
Gorai.004G042100 Gossypium raimondii
GSVIVG01026897001 Vitis vinifera
HanXRQChr16g0522791 Helianthus annuus
HanXRQChr16g0522801 Helianthus annuus
Haze_15489 Corylus avellana
HPP92_013926 Vanilla planifolia
HPP92_014013 Vanilla planifolia
HPP92_014015 Vanilla planifolia
Hund16928 Selenicereus undatus
Lalb_Chr04g0256901 Lupinus albus
Lalb_Chr04g0256911 Lupinus albus
Lalb_Chr17g0339751 Lupinus albus
Lj4g0008215 Lotus japonicus
Lj9C582G27 Lonicera japonica
Lsat_1_v5_gn_4_36200 Lactuca sativa
Manes.05G035400 Manihot esculenta
Mapoly0008s0021 Marchantia polymorpha
MBI18_g42176_MAGBIO Magnolia biondii
MCO15G184 Micromonas commoda
MD02G1227600 Malus domestica
MD02G1227800 Malus domestica
MD07G1084500 Malus domestica
Medtr4g119220 Medicago truncatula
MELO3C021216.2 Cucumis melo
Migut.B01743 Erythranthe guttata
MSTRG.17259 Avicennia marina
Nitab4.5_0007225g0010 Nicotiana tabacum
Nitab4.5_0007690g0020 Nicotiana tabacum
Nn2g11699 Nelumbo nucifera
Oeu017849.1 Olea europaea
Oeu034880.2 Olea europaea
Oeu058611.3 Olea europaea
Os03g0117200 Oryza sativa ssp. japonica
Os04g0177400 Oryza sativa ssp. japonica
Peaxi162Scf00020g00235 Petunia axillaris
PGR031G1307 Punica granatum
PGSC0003DMG400000164 Solanum tuberosum
Phvul.010G097500 Phaseolus vulgaris
Potri.002G158800 Populus trichocarpa
Potri.014G083000 Populus trichocarpa
Pp3c7_11900 Physcomitrium patens
PRCOL_00002917 Prasinoderma coloniale
Prupe.2G112100 Prunus persica
Psat4g028280 Pisum sativum
PSO782G1000 Papaver somniferum
QL08p049016 Quercus lobata
RcHm_v2.0_Chr0c20g0500231 Rosa chinensis
RcHm_v2.0_Chr1g0343231 Rosa chinensis
RcHm_v2.0_Chr2g0122991 Rosa chinensis
Rhsim07G0016300 Rhododendron simsii
Rhsim11G0072000 Rhododendron simsii
Sabra14G0060200 Salix brachista
SalBow1G2229 Salvia bowleyana
SalBow6G7245 Salvia bowleyana
Sc23g0002970 Simmondsia chinensis
Sed0013033 Sechium edule
SEGI_16261 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02331 Striga asiatica
SMO119G0342 Selaginella moellendorffii
Solyc01g094500.3 Solanum lycopersicum
Sopen01g038310 Solanum pennellii
Sp7g19030 Schrenkiella parvula
TAR629G1525 Trochodendron aralioides
TAR629G2224 Trochodendron aralioides
THA.LOC104812937 Tarenaya hassleriana
Thecc.01G360400 Theobroma cacao
Thhalv10025283m.g Eutrema salsugineum
Thhalv10026822m.g Eutrema salsugineum
TPR.G14634 Trifolium pratense
TWI14G0418 Tripterygium wilfordii
unitig_749.g13796 Utricularia gibba
vmacro13278 Vaccinium macrocarpon
vmacro14577 Vaccinium macrocarpon
VMungo0331G1782 Vigna mungo
Zm00001eb001180 Zea mays

User provided reference genes

Program Settings