Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05480 Brassica napus
A08p35120 Brassica napus
Aa31LG2G20300 Aethionema arabicum
Aa31LG5G14080 Aethionema arabicum
Actinidia12894 Actinidia chinensis
Ah.01g003330 Amaranthus hybridus
Ah.09g226670 Amaranthus hybridus
AL1G18910 Arabidopsis lyrata
Aqoxy7G02777 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IE2SQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67HGNM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L1LZAQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LRUS99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXB0UP Arachis hypogaea
AT1G08480 Arabidopsis thaliana
ATR1136G073 Amborella trichopoda
Atru.chr3.3067 Acer truncatum
Atru.chr5.2770 Acer truncatum
AUR62001577 Chenopodium quinoa
AUR62020205 Chenopodium quinoa
BcaB03g13330 Brassica carinata
BcaB07g32561 Brassica carinata
BcaB07g34092 Brassica carinata
BcaC07g38394 Brassica carinata
BolC5t29419H Brassica oleracea
BolC8t48832H Brassica oleracea
BraA06t23756Z Brassica rapa
BraA08t35421Z Brassica rapa
C05p06590 Brassica napus
C08p11520 Brassica napus
CAN.G1463.18 Capsicum annuum
CARHR008370 Cardamine hirsuta
Carub.0001s0784 Capsella rubella
Ca_18750_v3 Cicer arietinum L.
CBR_g29511 Chara braunii
CBR_g36250 Chara braunii
Cc01_g07910 Coffea canephora
CDE04G3167 Ceratophyllum demersum
CDE05G0523 Ceratophyllum demersum
Cfa010212 Carpinus fangiana
Ciclev10029485m.g Citrus clementina
CiPaw.13G126400 Carya illinoinensis
ClCG03G012390 Citrullus lanatus
COL.COLO4_25364 Corchorus olitorius
CsaV3_1G043620 Cucumis sativus L.
CSS0002518 Camellia sinensis var. sinensis
DCAR_021985 Daucus carota
Dinv18863 Davidia involucrata
Dinv21730 Davidia involucrata
Duzib168G2291 Durio zibethinus
Duzib170G0524 Durio zibethinus
ECA246G4934 Erigeron canadensis
EL10Ac7g16268 Beta vulgaris
Eucgr.J00592 Eucalyptus grandis
FAN04G2231 Fragaria x ananassa
FAN08G1342 Fragaria x ananassa
FAN11G1746 Fragaria x ananassa
FAN13G1722 Fragaria x ananassa
FAN18G0191 Fragaria x ananassa
FvH4_3g26740 Fragaria vesca
FvH4_5g32770 Fragaria vesca
Glyma.20G018300 Glycine max
Gohir.A08G007400 Gossypium hirsutum
Gohir.D08G017500 Gossypium hirsutum
Gorai.004G011900 Gossypium raimondii
GSVIVG01028464001 Vitis vinifera
HanXRQChr05g0163331 Helianthus annuus
Haze_23598 Corylus avellana
Hma1.2p1_0101F.1_g049710 Hydrangea macrophylla
Hma1.2p1_1258F.1_g270900 Hydrangea macrophylla
Hma1.2p1_1951F.1_g308770 Hydrangea macrophylla
HPP92_002034 Vanilla planifolia
Hund18808 Selenicereus undatus
Lalb_Chr05g0219631 Lupinus albus
Lalb_Chr16g0385131 Lupinus albus
Lj2E351T1 Lonicera japonica
Lj2g0024950 Lotus japonicus
Lsat_1_v5_gn_6_104840 Lactuca sativa
Manes.11G103800 Manihot esculenta
Mapoly0024s0049 Marchantia polymorpha
MBI17_g21974_MAGBIO Magnolia biondii
MD03G1160100 Malus domestica
MD11G1175100 Malus domestica
Medtr4g084320 Medicago truncatula
MELO3C015091.2 Cucumis melo
Migut.D02371 Erythranthe guttata
Migut.D02374 Erythranthe guttata
MSTRG.18800 Avicennia marina
MSTRG.21002 Avicennia marina
Nitab4.5_0002426g0070 Nicotiana tabacum
Nitab4.5_0003644g0030 Nicotiana tabacum
Nitab4.5_0005569g0020 Nicotiana tabacum
Nitab4.5_0015902g0010 Nicotiana tabacum
Nn1g08680 Nelumbo nucifera
Oeu026671.1 Olea europaea
Oeu031444.1 Olea europaea
Os08g0112800 Oryza sativa ssp. japonica
Peaxi162Scf00098g00148 Petunia axillaris
Peaxi162Scf00717g00217 Petunia axillaris
PGR083G2197 Punica granatum
PGSC0003DMG400002990 Solanum tuberosum
PGSC0003DMG400005906 Solanum tuberosum
Phvul.002G096700 Phaseolus vulgaris
Potri.009G001100 Populus trichocarpa
Pp3c1_6020 Physcomitrium patens
Pp3c7_24330 Physcomitrium patens
Prupe.6G148300 Prunus persica
Psat7g129160 Pisum sativum
PSO017G3706 Papaver somniferum
PSO017G4122 Papaver somniferum
PSO144G0132 Papaver somniferum
PSO325G0018 Papaver somniferum
PSO339G0217 Papaver somniferum
PSO447G0120 Papaver somniferum
PSO478G0762 Papaver somniferum
PSO541G3575 Papaver somniferum
QL02p021765 Quercus lobata
RcHm_v2.0_Chr5g0049161 Rosa chinensis
RcHm_v2.0_Chr7g0230441 Rosa chinensis
Rhsim13G0198500 Rhododendron simsii
Sabra09G0000700 Salix brachista
SalBow6G2115 Salvia bowleyana
Sc12g0000410 Simmondsia chinensis
Sc21g0006720 Simmondsia chinensis
Sed0017043 Sechium edule
Sed0018780 Sechium edule
SEGI_09212 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31950 Striga asiatica
SMO364G0346 Selaginella moellendorffii
Solyc06g073900.3 Solanum lycopersicum
Solyc11g071790.2 Solanum lycopersicum
Sopen06g030300 Solanum pennellii
Sopen11g029460 Solanum pennellii
Sp1g07130 Schrenkiella parvula
TAR628G1298 Trochodendron aralioides
THA.LOC104808952 Tarenaya hassleriana
THA.LOC104815294 Tarenaya hassleriana
Thecc.09G268300 Theobroma cacao
Thhalv10019305m.g Eutrema salsugineum
TPR.G18466 Trifolium pratense
TPR.G27448 Trifolium pratense
TPR.G38259 Trifolium pratense
TWI31G0222 Tripterygium wilfordii
unitig_746.g26601 Utricularia gibba
unitig_899.g15386 Utricularia gibba
vmacro04058 Vaccinium macrocarpon
VMungo0251G1441 Vigna mungo
Zm00001eb173990 Zea mays
Zm00001eb260600 Zea mays

User provided reference genes

Program Settings