Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32210 Brassica napus
Aa31LG1G21370 Aethionema arabicum
Aa31LG3G2670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4176 Anthoceros agrestis
Actinidia05431 Actinidia chinensis
Actinidia07927 Actinidia chinensis
AL6G13490 Arabidopsis lyrata
Aqoxy5G00209 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8NC760 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5K2FZ Arachis hypogaea
AT5G03905 Arabidopsis thaliana
ATR0174G014 Amborella trichopoda
Atru.chr8.1540 Acer truncatum
AUR62006181 Chenopodium quinoa
AUR62028526 Chenopodium quinoa
BcaB05g21795 Brassica carinata
BcaC03g12976 Brassica carinata
BcaC06g32094 Brassica carinata
BolC2t06126H Brassica oleracea
BolC9t60036H Brassica oleracea
BraA02t04792Z Brassica rapa
BraA10t45264Z Brassica rapa
C02p01610 Brassica napus
C09p73010 Brassica napus
CAN.G1164.37 Capsicum annuum
CAN.G1715.5 Capsicum annuum
CANSAT80G1737 Cannabis sativa
CARHR209350 Cardamine hirsuta
Carub.0006s0286 Capsella rubella
CBR_g27757 Chara braunii
Cc06_g05740 Coffea canephora
Cc06_g20090 Coffea canephora
CDE02G2337 Ceratophyllum demersum
CDE04G1264 Ceratophyllum demersum
Cfa016606 Carpinus fangiana
Ciclev10012954m.g Citrus clementina
CiPaw.09G013900 Carya illinoinensis
ClCG03G001800 Citrullus lanatus
ClCG03G002740 Citrullus lanatus
COL.COLO4_29735 Corchorus olitorius
Cpa.g.sc5.20 Carica papaya
Cre07.g349600 Chlamydomonas reinhardtii
CsaV3_1G013480 Cucumis sativus L.
CsaV3_1G033770 Cucumis sativus L.
CSS0009320 Camellia sinensis var. sinensis
CSS0031559 Camellia sinensis var. sinensis
DCAR_009165 Daucus carota
Dinv21208 Davidia involucrata
Dinv31686 Davidia involucrata
Duzib093G1830 Durio zibethinus
Duzib106G1905 Durio zibethinus
ECA236G3187 Erigeron canadensis
EL10Ac7g16917 Beta vulgaris
Eucgr.C01887 Eucalyptus grandis
Eucgr.C01891 Eucalyptus grandis
Eucgr.K02041 Eucalyptus grandis
Eucgr.L03536 Eucalyptus grandis
FAN02G1574 Fragaria x ananassa
FAN05G0382 Fragaria x ananassa
FAN05G5799 Fragaria x ananassa
FAN09G0264 Fragaria x ananassa
FAN14G5527 Fragaria x ananassa
FvH4_6g18690 Fragaria vesca
Glyma.03G195800 Glycine max
Glyma.13G153600 Glycine max
Gohir.A01G138100 Gossypium hirsutum
Gohir.A01G206300 Gossypium hirsutum
Gohir.D01G127800 Gossypium hirsutum
Gohir.D01G195700 Gossypium hirsutum
Gorai.002G158400 Gossypium raimondii
Gorai.002G239900 Gossypium raimondii
GSVIVG01033842001 Vitis vinifera
HanXRQChr15g0491011 Helianthus annuus
HanXRQChr17g0554781 Helianthus annuus
Haze_19610 Corylus avellana
Haze_27657 Corylus avellana
Hma1.2p1_0160F.1_g071250 Hydrangea macrophylla
Hma1.2p1_0232F.1_g097910 Hydrangea macrophylla
Hma1.2p1_0235F.1_g098620 Hydrangea macrophylla
Hma1.2p1_0580F.1_g182880 Hydrangea macrophylla
Hma1.2p1_3639F.1_g337130 Hydrangea macrophylla
HPP92_018556 Vanilla planifolia
Hund03985 Selenicereus undatus
Lalb_Chr20g0111711 Lupinus albus
Lalb_Chr25g0288321 Lupinus albus
Lj1g0017616 Lotus japonicus
Lj1g0020740 Lotus japonicus
Lj2A137T29 Lonicera japonica
Manes.08G025200 Manihot esculenta
Mapoly0089s0053 Marchantia polymorpha
MBI17_g08354_MAGBIO Magnolia biondii
MCO02G129 Micromonas commoda
MD06G1040300 Malus domestica
MD16G1269100 Malus domestica
Medtr7g104600 Medicago truncatula
MELO3C020686.2 Cucumis melo
Migut.L01778 Erythranthe guttata
MSTRG.10365 Avicennia marina
MSTRG.5844 Avicennia marina
Nitab4.5_0000368g0180 Nicotiana tabacum
Nitab4.5_0003512g0070 Nicotiana tabacum
Nitab4.5_0004873g0070 Nicotiana tabacum
Nn6g34902 Nelumbo nucifera
Os08g0363800 Oryza sativa ssp. japonica
Os08g0369700 Oryza sativa ssp. japonica
Peaxi162Scf00673g00319 Petunia axillaris
PGR142G4351 Punica granatum
PGSC0003DMG403002803 Solanum tuberosum
Phvul.003G095500 Phaseolus vulgaris
Potri.006G084300 Populus trichocarpa
Pp3c3_34710 Physcomitrium patens
PRCOL_00000026 Prasinoderma coloniale
Prupe.5G046500 Prunus persica
Psat3g033320 Pisum sativum
PSO339G3768 Papaver somniferum
PSO384G4260 Papaver somniferum
QL07p038766 Quercus lobata
QL07p039017 Quercus lobata
RcHm_v2.0_Chr3g0473661 Rosa chinensis
Rhsim03G0075200 Rhododendron simsii
Sabra06G0064000 Salix brachista
SalBow5G1155 Salvia bowleyana
SalBow5G2289 Salvia bowleyana
SalBow5G4790 Salvia bowleyana
Sc20g0006290 Simmondsia chinensis
Sed0018976 Sechium edule
Sed0022281 Sechium edule
SEGI_14769 Sequoiadendron giganteum
SGA_v2.0_scaffold184G39963 Striga asiatica
SGA_v2.0_scaffold35G14070 Striga asiatica
SMO171G0092 Selaginella moellendorffii
Solyc01g100410.3 Solanum lycopersicum
Sopen01g043930 Solanum pennellii
Sp6g38820 Schrenkiella parvula
TAR365G0253 Trochodendron aralioides
TAR369G1152 Trochodendron aralioides
TAR623G0616 Trochodendron aralioides
THA.LOC104826944 Tarenaya hassleriana
Thecc.05G089000 Theobroma cacao
Thhalv10014896m.g Eutrema salsugineum
TPR.G30035 Trifolium pratense
TWI53G1915 Tripterygium wilfordii
TWI77G0413 Tripterygium wilfordii
unitig_899.g15202 Utricularia gibba
vmacro07408 Vaccinium macrocarpon
vmacro08717 Vaccinium macrocarpon
VMungo1215G1361 Vigna mungo
Zm00001eb042730 Zea mays
Zm00001eb170730 Zea mays

User provided reference genes

Program Settings