Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36350 Brassica napus
A02p07120 Brassica napus
A10p16680 Brassica napus
Aa31LG4G15620 Aethionema arabicum
Actinidia23927 Actinidia chinensis
Actinidia34418 Actinidia chinensis
Ah.08g219770 Amaranthus hybridus
AL8G35930 Arabidopsis lyrata
Aqoxy1G00915 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MN3VL9 Arachis hypogaea
AT5G59460 Arabidopsis thaliana
ATR0559G067 Amborella trichopoda
Atru.chr3.3979 Acer truncatum
AUR62001761 Chenopodium quinoa
AUR62009547 Chenopodium quinoa
BcaB01g04577 Brassica carinata
BcaB01g04584 Brassica carinata
BcaB05g22508 Brassica carinata
BcaB08g36255 Brassica carinata
BcaB08g36256 Brassica carinata
BcaC01g06521 Brassica carinata
BcaC03g14012 Brassica carinata
BcaC04g19766 Brassica carinata
BcaC09g48433 Brassica carinata
BolC1t04941H Brassica oleracea
BolC2t07348H Brassica oleracea
BolC3t13819H Brassica oleracea
BolC9t58049H Brassica oleracea
BraA02t05793Z Brassica rapa
BraA10t43749Z Brassica rapa
C01p49830 Brassica napus
C02p12480 Brassica napus
C03p13690 Brassica napus
C03p13710 Brassica napus
C09p51870 Brassica napus
CANSAT54G1321 Cannabis sativa
CARHR285830 Cardamine hirsuta
Carub.0008s2013 Capsella rubella
Cc01_g13080 Coffea canephora
CDE02G2808 Ceratophyllum demersum
CDE08G1537 Ceratophyllum demersum
Cfa011521 Carpinus fangiana
Ciclev10029345m.g Citrus clementina
CiPaw.13G091800 Carya illinoinensis
CiPaw.14G067400 Carya illinoinensis
ClCG02G020020 Citrullus lanatus
COL.COLO4_18543 Corchorus olitorius
Cpa.g.sc81.121 Carica papaya
CsaV3_6G016720 Cucumis sativus L.
CSS0021101 Camellia sinensis var. sinensis
CSS0032367 Camellia sinensis var. sinensis
CSS0033668 Camellia sinensis var. sinensis
DCAR_005961 Daucus carota
Dinv06259 Davidia involucrata
Dinv17028 Davidia involucrata
Dinv42976 Davidia involucrata
Dinv43123 Davidia involucrata
Duzib150G0269 Durio zibethinus
Duzib168G2185 Durio zibethinus
ECA247G2861 Erigeron canadensis
EL10Ac7g16043 Beta vulgaris
Eucgr.B02327 Eucalyptus grandis
FAN11G1834 Fragaria x ananassa
FAN11G2014 Fragaria x ananassa
FAN16G3214 Fragaria x ananassa
FAN21G1361 Fragaria x ananassa
FAN21G1380 Fragaria x ananassa
FAN25G0408 Fragaria x ananassa
FAN25G2664 Fragaria x ananassa
FvH4_3g36750 Fragaria vesca
FvH4_3g41460 Fragaria vesca
Glyma.13G337700 Glycine max
Glyma.15G036800 Glycine max
Gohir.A03G043800 Gossypium hirsutum
Gohir.A05G094300 Gossypium hirsutum
Gohir.D03G123600 Gossypium hirsutum
Gohir.D05G094800 Gossypium hirsutum
Gorai.003G130300 Gossypium raimondii
Gorai.009G098000 Gossypium raimondii
GSVIVG01024930001 Vitis vinifera
HanXRQChr07g0197281 Helianthus annuus
HanXRQChr12g0374241 Helianthus annuus
Haze_24126 Corylus avellana
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla
HPP92_006623 Vanilla planifolia
Hund18896 Selenicereus undatus
Lalb_Chr01g0003571 Lupinus albus
Lalb_Chr03g0026531 Lupinus albus
Lj1A149T62 Lonicera japonica
Lj3g0014072 Lotus japonicus
Lsat_1_v5_gn_9_23841 Lactuca sativa
Manes.01G171600 Manihot esculenta
Mapoly0094s0023 Marchantia polymorpha
MBI14_g12121_MAGBIO Magnolia biondii
MD03G1088800 Malus domestica
MD11G1097800 Malus domestica
Medtr2g097480 Medicago truncatula
Medtr4g064210 Medicago truncatula
MELO3C025903.2 Cucumis melo
Migut.D02075 Erythranthe guttata
MSTRG.18567 Avicennia marina
Nitab4.5_0000272g0050 Nicotiana tabacum
Nitab4.5_0006945g0010 Nicotiana tabacum
Nitab4.5_0007132g0030 Nicotiana tabacum
Nn2g11147 Nelumbo nucifera
Nn2g13381 Nelumbo nucifera
Oeu002429.1 Olea europaea
Oeu053883.1 Olea europaea
Os01g0144600 Oryza sativa ssp. japonica
Peaxi162Scf00092g01117 Petunia axillaris
Peaxi162Scf00122g01415 Petunia axillaris
PGR102G0830 Punica granatum
PGSC0003DMG400002149 Solanum tuberosum
Phvul.L006843 Phaseolus vulgaris
Potri.001G242104 Populus trichocarpa
Potri.009G033400 Populus trichocarpa
Pp3c16_15780 Physcomitrium patens
Prupe.6G073200 Prunus persica
Psat5g285160 Pisum sativum
PSO339G2709 Papaver somniferum
QL01p031100 Quercus lobata
RcHm_v2.0_Chr5g0065711 Rosa chinensis
Rhsim13G0078800 Rhododendron simsii
Sabra09G0023800 Salix brachista
Sabra16G0147000 Salix brachista
SalBow3G1756 Salvia bowleyana
Sc12g0001370 Simmondsia chinensis
Sed0008555 Sechium edule
SEGI_30466 Sequoiadendron giganteum
SGA_v2.0_scaffold41G15739 Striga asiatica
SHI05935 Sapria himalayana
Solyc06g005600.3 Solanum lycopersicum
Sopen06g001560 Solanum pennellii
Sp6g21150 Schrenkiella parvula
TAR633G0520 Trochodendron aralioides
TAR636G1117 Trochodendron aralioides
THA.LOC104810769 Tarenaya hassleriana
Thecc.09G318900 Theobroma cacao
Thhalv10002686m.g Eutrema salsugineum
Thhalv10014846m.g Eutrema salsugineum
TPR.G5593 Trifolium pratense
TWI75G0636 Tripterygium wilfordii
TWI79G0863 Tripterygium wilfordii
unitig_37.g12674 Utricularia gibba
vmacro03047 Vaccinium macrocarpon
VMungo1080G1028 Vigna mungo
Zm00001eb124480 Zea mays

User provided reference genes

Program Settings