Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01870 Brassica napus
Aa31LG6G13970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.386 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2728 Anthoceros agrestis
Actinidia16491 Actinidia chinensis
Ah.02g120540 Amaranthus hybridus
Ah.06g186350 Amaranthus hybridus
AL7G13770 Arabidopsis lyrata
Aqoxy5G01233 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.X0LXK2 Arachis hypogaea
AT4G37000 Arabidopsis thaliana
ATR0009G017 Amborella trichopoda
Atru.chr3.332 Acer truncatum
Atru.chr3.333 Acer truncatum
Atru.chr3.335 Acer truncatum
AUR62001931 Chenopodium quinoa
AUR62003879 Chenopodium quinoa
BcaNung02518 Brassica carinata
BolC1t00195H Brassica oleracea
BraA01t00176Z Brassica rapa
C01p02010 Brassica napus
CAN.G11.7 Capsicum annuum
CANSAT01G2652 Cannabis sativa
CANSAT11G1602 Cannabis sativa
CANSAT11G2671 Cannabis sativa
CARHR245500 Cardamine hirsuta
Carub.0007s0320 Capsella rubella
Ca_05570_v3 Cicer arietinum L.
CBR_g39811 Chara braunii
CBR_g39812 Chara braunii
Cc03_g11370 Coffea canephora
CDE02G2298 Ceratophyllum demersum
CDE02G3886 Ceratophyllum demersum
Cfa004018 Carpinus fangiana
Cfa004020 Carpinus fangiana
Ciclev10026041m.g Citrus clementina
Ciclev10026248m.g Citrus clementina
CiPaw.01G018500 Carya illinoinensis
CiPaw.02G008500 Carya illinoinensis
ClCG02G012600 Citrullus lanatus
ClCG02G012610 Citrullus lanatus
COL.COLO4_11407 Corchorus olitorius
Cpa.g.sc55.151 Carica papaya
CsaV3_2G016720 Cucumis sativus L.
CsaV3_2G016730 Cucumis sativus L.
CSS0031276 Camellia sinensis var. sinensis
DCAR_021441 Daucus carota
Dinv29984 Davidia involucrata
Dinv39853 Davidia involucrata
Duzib147G0592 Durio zibethinus
Duzib187G0496 Durio zibethinus
ECA238G3150 Erigeron canadensis
EL10Ac6g15748 Beta vulgaris
Eucgr.I00930 Eucalyptus grandis
FAN01G0777 Fragaria x ananassa
FAN06G0805 Fragaria x ananassa
FAN10G3007 Fragaria x ananassa
FvH4_7g06480 Fragaria vesca
Glyma.02G301700 Glycine max
Glyma.14G012500 Glycine max
Gohir.A11G192100 Gossypium hirsutum
Gohir.D11G198600 Gossypium hirsutum
Gorai.007G212700 Gossypium raimondii
GSVIVG01022135001 Vitis vinifera
HanXRQChr14g0442821 Helianthus annuus
HanXRQChr14g0442841 Helianthus annuus
Haze_15405 Corylus avellana
Haze_16997 Corylus avellana
Haze_16999 Corylus avellana
Hma1.2p1_0200F.1_g085840 Hydrangea macrophylla
Hma1.2p1_0200F.1_g085850 Hydrangea macrophylla
Hma1.2p1_0200F.1_g085860 Hydrangea macrophylla
Hma1.2p1_2839F.1_g329295 Hydrangea macrophylla
Hma1.2p1_2839F.1_g329297 Hydrangea macrophylla
Hma1.2p1_2839F.1_g329298 Hydrangea macrophylla
HPP92_019276 Vanilla planifolia
HPP92_028287 Vanilla planifolia
Hund13537 Selenicereus undatus
Hund13538 Selenicereus undatus
Hund13551 Selenicereus undatus
Lalb_Chr17g0348991 Lupinus albus
Lj7A69G43 Lonicera japonica
LjContig00081g0020523 Lotus japonicus
LjContig00272g0002438 Lotus japonicus
LjContig00272g0020566 Lotus japonicus
Lsat_1_v5_gn_2_84140 Lactuca sativa
Manes.13G124600 Manihot esculenta
Mapoly0002s0315 Marchantia polymorpha
Mapoly0002s0316 Marchantia polymorpha
Mapoly0007s0155 Marchantia polymorpha
MD15G1283600 Malus domestica
Medtr5g096150 Medicago truncatula
MELO3C020912.2 Cucumis melo
MELO3C020913.2 Cucumis melo
Migut.H00434 Erythranthe guttata
MSTRG.23749 Avicennia marina
Nitab4.5_0000033g0420 Nicotiana tabacum
Nitab4.5_0001064g0040 Nicotiana tabacum
Nn2g10761 Nelumbo nucifera
Nn7g36483 Nelumbo nucifera
Oeu004826.1 Olea europaea
Os10g0389100 Oryza sativa ssp. japonica
Os10g0389200 Oryza sativa ssp. japonica
Os10g0389300 Oryza sativa ssp. japonica
Peaxi162Scf00685g00059 Petunia axillaris
PGR004G2460 Punica granatum
PGSC0003DMG400018987 Solanum tuberosum
Phvul.008G280200 Phaseolus vulgaris
Phvul.008G280300 Phaseolus vulgaris
Potri.007G043500 Populus trichocarpa
Potri.007G043600 Populus trichocarpa
Potri.007G043700 Populus trichocarpa
Pp3c15_3570 Physcomitrium patens
Prupe.7G133700 Prunus persica
Psat2g006800 Pisum sativum
PSO170G3325 Papaver somniferum
PSO210G5017 Papaver somniferum
QL06p041440 Quercus lobata
QL06p041448 Quercus lobata
RcHm_v2.0_Chr1g0334851 Rosa chinensis
Rhsim08G0100700 Rhododendron simsii
Sabra07G0038400 Salix brachista
Sabra07G0038500 Salix brachista
SalBow6G7153 Salvia bowleyana
Sc07g0000030 Simmondsia chinensis
Sed0020584 Sechium edule
Sed0024126 Sechium edule
SGA_v2.0_scaffold15G07296 Striga asiatica
SMO348G0076 Selaginella moellendorffii
Solyc03g044470.4 Solanum lycopersicum
Sopen03g008630 Solanum pennellii
Sp7g34760 Schrenkiella parvula
TAR376G0493 Trochodendron aralioides
THA.LOC104807582 Tarenaya hassleriana
Thecc.01G055400 Theobroma cacao
Thhalv10025731m.g Eutrema salsugineum
Thhalv10027845m.g Eutrema salsugineum
Thhalv10027846m.g Eutrema salsugineum
TPR.G22585 Trifolium pratense
TPR.G22736 Trifolium pratense
TPR.G36603 Trifolium pratense
TPR.G36604 Trifolium pratense
TWI09G1278 Tripterygium wilfordii
TWI53G0428 Tripterygium wilfordii
TWI73G1146 Tripterygium wilfordii
unitig_736.g22663 Utricularia gibba
vmacro17952 Vaccinium macrocarpon
VMungo0647G1648 Vigna mungo
Zm00001eb027950 Zea mays

User provided reference genes

Program Settings