Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36240 Brassica napus
A06p14700 Brassica napus
A06p14710 Brassica napus
A06p40210 Brassica napus
Aa31LG2G4200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3570 Anthoceros agrestis
Actinidia17553 Actinidia chinensis
Actinidia38767 Actinidia chinensis
Actinidia38785 Actinidia chinensis
Ah.10g031580 Amaranthus hybridus
AL5G18820 Arabidopsis lyrata
Aqoxy3G03411 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.87XTYU Arachis hypogaea
AT3G28970 Arabidopsis thaliana
ATR0124G009 Amborella trichopoda
Atru.chr8.179 Acer truncatum
AUR62034404 Chenopodium quinoa
AUR62039809 Chenopodium quinoa
BcaC06g33661 Brassica carinata
BolC7t44311H Brassica oleracea
BraA06t26936Z Brassica rapa
C07p37900 Brassica napus
CAN.G206.156 Capsicum annuum
CANSAT64G0414 Cannabis sativa
CARHR152070 Cardamine hirsuta
Carub.0005s0755 Capsella rubella
Ca_02909_v3 Cicer arietinum L.
CBR_g12339 Chara braunii
Cc07_g03440 Coffea canephora
CDE04G1098 Ceratophyllum demersum
CDE07G1068 Ceratophyllum demersum
Cfa007567 Carpinus fangiana
Ciclev10012215m.g Citrus clementina
CiPaw.03G025700 Carya illinoinensis
CiPaw.04G016600 Carya illinoinensis
ClCG09G018190 Citrullus lanatus
COL.COLO4_08441 Corchorus olitorius
Cpa.g.sc1691.1 Carica papaya
Cre12.g488250 Chlamydomonas reinhardtii
CsaV3_5G038070 Cucumis sativus L.
CSS0023109 Camellia sinensis var. sinensis
CSS0046814 Camellia sinensis var. sinensis
DCAR_011091 Daucus carota
Dinv11519 Davidia involucrata
Dinv33769 Davidia involucrata
Duzib147G1333 Durio zibethinus
Duzib187G1623 Durio zibethinus
Duzib264G0898 Durio zibethinus
ECA232G4685 Erigeron canadensis
ECA246G4730 Erigeron canadensis
EL10Ac2g02983 Beta vulgaris
Eucgr.J01350 Eucalyptus grandis
FAN02G2251 Fragaria x ananassa
FAN05G1406 Fragaria x ananassa
FAN09G3433 Fragaria x ananassa
FAN14G4158 Fragaria x ananassa
FAN14G4526 Fragaria x ananassa
FvH4_6g48370 Fragaria vesca
Glyma.09G237300 Glycine max
Glyma.18G260200 Glycine max
Gohir.A05G366750 Gossypium hirsutum
Gohir.A05G367000 Gossypium hirsutum
Gohir.A11G069700 Gossypium hirsutum
Gohir.D04G048100 Gossypium hirsutum
Gorai.007G079100 Gossypium raimondii
Gorai.012G053600 Gossypium raimondii
GSVIVG01011430001 Vitis vinifera
HanXRQChr09g0265211 Helianthus annuus
HanXRQChr13g0399841 Helianthus annuus
Hma1.2p1_0409F.1_g146890 Hydrangea macrophylla
Hund13212 Selenicereus undatus
Lalb_Chr04g0258601 Lupinus albus
Lj1g0002056 Lotus japonicus
Lj1g0010103 Lotus japonicus
Lj4A110G78 Lonicera japonica
Lj4A110T81 Lonicera japonica
Lju41A14T30 Lonicera japonica
Lsat_1_v5_gn_3_100161 Lactuca sativa
Manes.02G047000 Manihot esculenta
Mapoly0052s0047 Marchantia polymorpha
MBI01_g14107_MAGBIO Magnolia biondii
MBI02_g15397_MAGBIO Magnolia biondii
MBI02_g32981_MAGBIO Magnolia biondii
MBI02_g33280_MAGBIO Magnolia biondii
MBI06_g17099_MAGBIO Magnolia biondii
MBI12_g07753_MAGBIO Magnolia biondii
MBI12_g43017_MAGBIO Magnolia biondii
MBI13_g07146_MAGBIO Magnolia biondii
MCO13G179 Micromonas commoda
MD09G1052100 Malus domestica
Medtr7g010920 Medicago truncatula
MELO3C021990.2 Cucumis melo
MELO3C033608.2 Cucumis melo
Migut.H00929 Erythranthe guttata
MSTRG.3242 Avicennia marina
Nitab4.5_0000564g0010 Nicotiana tabacum
Nitab4.5_0002980g0100 Nicotiana tabacum
Nn3g17257 Nelumbo nucifera
Oeu027852.1 Olea europaea
Oeu027854.1 Olea europaea
Os07g0631000 Oryza sativa ssp. japonica
Peaxi162Scf00129g00125 Petunia axillaris
PGR083G2047 Punica granatum
PGSC0003DMG400001423 Solanum tuberosum
Phvul.008G036701 Phaseolus vulgaris
Phvul.008G036800 Phaseolus vulgaris
Potri.004G122100 Populus trichocarpa
Potri.017G084300 Populus trichocarpa
Pp3c16_19930 Physcomitrium patens
Pp3c6_28870 Physcomitrium patens
PRCOL_00003335 Prasinoderma coloniale
Prupe.3G266600 Prunus persica
Psat0s1002g0160 Pisum sativum
Psat3g197680 Pisum sativum
PSO013G0402 Papaver somniferum
PSO017G6367 Papaver somniferum
PSO478G2065 Papaver somniferum
PSO832G1119 Papaver somniferum
QL02p082399 Quercus lobata
RcHm_v2.0_Chr2g0168311 Rosa chinensis
Rhsim08G0070200 Rhododendron simsii
Sabra04G0090700 Salix brachista
SalBow1G0614 Salvia bowleyana
SalBow1G7872 Salvia bowleyana
Sc10g0003560 Simmondsia chinensis
Sed0013315 Sechium edule
SEGI_18971 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05603 Striga asiatica
SGA_v2.0_scaffold90G27627 Striga asiatica
SMO057G0003 Selaginella moellendorffii
SMO340G0063 Selaginella moellendorffii
SMO356G0101 Selaginella moellendorffii
SMO356G0302 Selaginella moellendorffii
Solyc02g088010.3 Solanum lycopersicum
Sopen02g032750 Solanum pennellii
Sp2g17620 Schrenkiella parvula
TAR374G0051 Trochodendron aralioides
TAR629G2463 Trochodendron aralioides
THA.LOC104805471 Tarenaya hassleriana
Thecc.04G083400 Theobroma cacao
Thhalv10004712m.g Eutrema salsugineum
TPR.G27597 Trifolium pratense
TPR.G33585 Trifolium pratense
TWI60G0928 Tripterygium wilfordii
unitig_21.g20929 Utricularia gibba
unitig_899.g15525 Utricularia gibba
vmacro18188 Vaccinium macrocarpon
VMungo1383G3357 Vigna mungo
Zm00001eb328330 Zea mays

User provided reference genes

Program Settings