Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16270 Brassica napus
A10p07970 Brassica napus
Aa31LG3G7660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.798 Anthoceros agrestis
Actinidia01035 Actinidia chinensis
Actinidia31763 Actinidia chinensis
Ah.12g058550 Amaranthus hybridus
AL8G25410 Arabidopsis lyrata
Aqoxy180s002 Aquilegia oxysepala
Aqoxy180s003 Aquilegia oxysepala
Aqoxy3G02658 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0K4XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GMTF4T Arachis hypogaea
AT5G51150 Arabidopsis thaliana
ATR0665G298 Amborella trichopoda
Atru.chr6.1976 Acer truncatum
AUR62010468 Chenopodium quinoa
AUR62030431 Chenopodium quinoa
BcaB08g35470 Brassica carinata
BcaC01g06078 Brassica carinata
BcaC01g06096 Brassica carinata
BcaC04g20727 Brassica carinata
BolC3t14304H Brassica oleracea
BolC9t56883H Brassica oleracea
BraA03t10918Z Brassica rapa
BraSC35t46003Z Brassica rapa
C03p19160 Brassica napus
C09p39840 Brassica napus
CAN.G1016.3 Capsicum annuum
CANSAT56G0842 Cannabis sativa
CARHR256900 Cardamine hirsuta
Carub.0008s1119 Capsella rubella
Ca_09787_v3 Cicer arietinum L.
CBR_g55399 Chara braunii
Cc00_g13040 Coffea canephora
CDE02G4339 Ceratophyllum demersum
CDE11G0390 Ceratophyllum demersum
Cfa013604 Carpinus fangiana
Ciclev10031244m.g Citrus clementina
CiPaw.07G183100 Carya illinoinensis
CiPaw.08G042700 Carya illinoinensis
ClCG01G004880 Citrullus lanatus
COL.COLO4_37308 Corchorus olitorius
Cpa.g.sc13.221 Carica papaya
CsaV3_5G005110 Cucumis sativus L.
CSS0004669 Camellia sinensis var. sinensis
CSS0009087 Camellia sinensis var. sinensis
DCAR_014644 Daucus carota
Dinv16894 Davidia involucrata
Dinv34534 Davidia involucrata
Duzib068G0066 Durio zibethinus
Duzib084G1450 Durio zibethinus
Duzib205G0755 Durio zibethinus
ECA232G0310 Erigeron canadensis
EL10Ac5g12571 Beta vulgaris
Eucgr.A02933 Eucalyptus grandis
FAN03G3358 Fragaria x ananassa
FAN06G0285 Fragaria x ananassa
FAN06G1714 Fragaria x ananassa
FAN06G2940 Fragaria x ananassa
FAN06G3183 Fragaria x ananassa
FAN06G4210 Fragaria x ananassa
FvH4_7g26640 Fragaria vesca
Glyma.02G174600 Glycine max
Glyma.10G191600 Glycine max
Glyma.20G198600 Glycine max
Gohir.A03G061000 Gossypium hirsutum
Gohir.A07G044600 Gossypium hirsutum
Gohir.A09G248400 Gossypium hirsutum
Gohir.D03G105000 Gossypium hirsutum
Gohir.D07G049050 Gossypium hirsutum
Gohir.D09G249400 Gossypium hirsutum
Gorai.001G052200 Gossypium raimondii
Gorai.003G111000 Gossypium raimondii
Gorai.006G273700 Gossypium raimondii
GSVIVG01024473001 Vitis vinifera
HanXRQChr09g0252201 Helianthus annuus
Haze_22225 Corylus avellana
Hma1.2p1_0502F.1_g167940 Hydrangea macrophylla
Hma1.2p1_0502F.1_g167960 Hydrangea macrophylla
HPP92_022111 Vanilla planifolia
Hund11017 Selenicereus undatus
Hund14297 Selenicereus undatus
Lalb_Chr06g0169601 Lupinus albus
Lalb_Chr21g0312591 Lupinus albus
Lj5g0020821 Lotus japonicus
Lj8A49G38 Lonicera japonica
Lsat_1_v5_gn_5_160981 Lactuca sativa
Lsat_1_v5_gn_8_138720 Lactuca sativa
Lsat_1_v5_gn_9_58401 Lactuca sativa
Manes.06G129800 Manihot esculenta
Manes.14G041100 Manihot esculenta
Mapoly0001s0004 Marchantia polymorpha
Mapoly0103s0064 Marchantia polymorpha
Mapoly0175s0021 Marchantia polymorpha
MBI04_g13852_MAGBIO Magnolia biondii
MBI12_g00597_MAGBIO Magnolia biondii
MCO05G049 Micromonas commoda
MD07G1241200 Malus domestica
Medtr1g072830 Medicago truncatula
MELO3C005445.2 Cucumis melo
Migut.F00542 Erythranthe guttata
MSTRG.27231 Avicennia marina
Nitab4.5_0002293g0040 Nicotiana tabacum
Nn1g00766 Nelumbo nucifera
Oeu030873.1 Olea europaea
Os07g0494900 Oryza sativa ssp. japonica
Peaxi162Scf00073g01724 Petunia axillaris
PGR042G3269 Punica granatum
PGSC0003DMG400008342 Solanum tuberosum
Phvul.L001785 Phaseolus vulgaris
Potri.012G113700 Populus trichocarpa
Potri.015G111200 Populus trichocarpa
Pp3c1_10120 Physcomitrium patens
Pp3c2_28300 Physcomitrium patens
Prupe.2G270300 Prunus persica
Psat6g140160 Pisum sativum
PSO063G0983 Papaver somniferum
PSO782G2232 Papaver somniferum
QL03p000240 Quercus lobata
QL09p027386 Quercus lobata
RcHm_v2.0_Chr1g0373261 Rosa chinensis
Rhsim09G0188500 Rhododendron simsii
Sabra12G0082800 Salix brachista
Sabra15G0133000 Salix brachista
SalBow3G1983 Salvia bowleyana
Sc17g0004550 Simmondsia chinensis
Sed0002589 Sechium edule
Sed0019867 Sechium edule
Sed0023274 Sechium edule
SEGI_24268 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20847 Striga asiatica
SMO364G0598 Selaginella moellendorffii
Solyc03g093990.4 Solanum lycopersicum
Sopen03g024840 Solanum pennellii
Sopen06g002160 Solanum pennellii
Sp6g13360 Schrenkiella parvula
TAR375G0717 Trochodendron aralioides
THA.LOC104811541 Tarenaya hassleriana
Thecc.03G145300 Theobroma cacao
Thhalv10013222m.g Eutrema salsugineum
TWI14G0627 Tripterygium wilfordii
TWI39G0803 Tripterygium wilfordii
unitig_46.g18758 Utricularia gibba
vmacro09929 Vaccinium macrocarpon
VMungo0720G1976 Vigna mungo
Zm00001eb322080 Zea mays
Zm00001eb322110 Zea mays
Zm00001eb390340 Zea mays

User provided reference genes

Program Settings