Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05270 Brassica napus
A03p09380 Brassica napus
A10p20470 Brassica napus
Aa31LG11G10490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis
Actinidia08511 Actinidia chinensis
Actinidia36991 Actinidia chinensis
Ah.07g202120 Amaranthus hybridus
AL6G30570 Arabidopsis lyrata
Aqoxy3G00936 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea
AT5G19150 Arabidopsis thaliana
ATR0743G104 Amborella trichopoda
Atru.chr4.2544 Acer truncatum
Atru.chr4.2545 Acer truncatum
Atru.chr4.2547 Acer truncatum
AUR62026218 Chenopodium quinoa
AUR62026378 Chenopodium quinoa
BcaB01g04874 Brassica carinata
BcaB01g05136 Brassica carinata
BcaB01g05294 Brassica carinata
BcaB05g23373 Brassica carinata
BcaC03g13646 Brassica carinata
BcaC04g18592 Brassica carinata
BolC2t06940H Brassica oleracea
BolC3t13560H Brassica oleracea
BraA02t05485Z Brassica rapa
BraA03t10257Z Brassica rapa
C02p10390 Brassica napus
C03p10860 Brassica napus
C03p10910 Brassica napus
C03p10950 Brassica napus
C03p10960 Brassica napus
CAN.G69.27 Capsicum annuum
CANSAT78G0752 Cannabis sativa
CARHR193800 Cardamine hirsuta
Carub.0006s1748 Capsella rubella
Ca_00634_v3 Cicer arietinum L.
Ca_00654_v3 Cicer arietinum L.
CBR_g26053 Chara braunii
Cc03_g03230 Coffea canephora
CDE07G1289 Ceratophyllum demersum
Cfa015597 Carpinus fangiana
Cfa024379 Carpinus fangiana
Ciclev10005119m.g Citrus clementina
CiPaw.02G093300 Carya illinoinensis
ClCG05G005360 Citrullus lanatus
COL.COLO4_26626 Corchorus olitorius
Cpa.g.sc147.5 Carica papaya
Cpa.g.sc147.6 Carica papaya
Cpa.g.sc147.7 Carica papaya
Cre05.g234664 Chlamydomonas reinhardtii
Cre06.g250500 Chlamydomonas reinhardtii
CsaV3_3G013610 Cucumis sativus L.
CSS0000312 Camellia sinensis var. sinensis
CSS0017868 Camellia sinensis var. sinensis
Dinv38405 Davidia involucrata
Dinv44490 Davidia involucrata
Duzib151G0886 Durio zibethinus
ECA234G2869 Erigeron canadensis
EL10Ac3g05973 Beta vulgaris
Eucgr.B01122 Eucalyptus grandis
FAN07G1160 Fragaria x ananassa
FAN07G2774 Fragaria x ananassa
FAN17G0130 Fragaria x ananassa
FAN22G1009 Fragaria x ananassa
FvH4_4g14760 Fragaria vesca
Glyma.07G257800 Glycine max
Glyma.17G016200 Glycine max
Gohir.A02G029300 Gossypium hirsutum
Gohir.D02G037100 Gossypium hirsutum
Gorai.005G041000 Gossypium raimondii
GSVIVG01017902001 Vitis vinifera
HanXRQChr04g0113561 Helianthus annuus
HanXRQChr12g0359311 Helianthus annuus
Haze_00947 Corylus avellana
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla
HPP92_005520 Vanilla planifolia
HPP92_005588 Vanilla planifolia
Hund03167 Selenicereus undatus
Hund12013 Selenicereus undatus
Lalb_Chr18g0056141 Lupinus albus
Lj6A574T37 Lonicera japonica
Lj6g0002948 Lotus japonicus
Lj6g0017812 Lotus japonicus
Manes.03G183100 Manihot esculenta
Mapoly0063s0079 Marchantia polymorpha
MBI14_g28267_MAGBIO Magnolia biondii
MCO05G313 Micromonas commoda
MD16G1186000 Malus domestica
Medtr2g022530 Medicago truncatula
MELO3C006557.2 Cucumis melo
Migut.G00301 Erythranthe guttata
MSTRG.10011 Avicennia marina
MSTRG.4001 Avicennia marina
Nitab4.5_0000630g0050 Nicotiana tabacum
Nitab4.5_0005927g0020 Nicotiana tabacum
Nn1g02182 Nelumbo nucifera
Oeu042787.2 Olea europaea
Os11g0276300 Oryza sativa ssp. japonica
Peaxi162Scf00134g02033 Petunia axillaris
PGR142G2933 Punica granatum
PGSC0003DMG400009024 Solanum tuberosum
Phvul.003G091700 Phaseolus vulgaris
Potri.008G203600 Populus trichocarpa
Pp3c8_1650 Physcomitrium patens
PRCOL_00001617 Prasinoderma coloniale
Prupe.1G152800 Prunus persica
Psat1g182800 Pisum sativum
PSO017G3853 Papaver somniferum
PSO478G2898 Papaver somniferum
QL06p003872 Quercus lobata
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis
RcHm_v2.0_Chr3g0483801 Rosa chinensis
RcHm_v2.0_Chr4g0417841 Rosa chinensis
Rhsim02G0020900 Rhododendron simsii
Sabra08G0157900 Salix brachista
SalBow2G0224 Salvia bowleyana
Sc13g0004100 Simmondsia chinensis
Sed0017941 Sechium edule
SEGI_07547 Sequoiadendron giganteum
SEGI_12399 Sequoiadendron giganteum
SEGI_27897 Sequoiadendron giganteum
SEGI_35556 Sequoiadendron giganteum
SGA_v2.0_scaffold39G15320 Striga asiatica
SHI00391 Sapria himalayana
SMO361G0104 Selaginella moellendorffii
Solyc01g079860.3 Solanum lycopersicum
Sopen01g031620 Solanum pennellii
Sp6g25210 Schrenkiella parvula
TAR365G0616 Trochodendron aralioides
THA.LOC104818802 Tarenaya hassleriana
Thecc.04G224100 Theobroma cacao
Thhalv10013830m.g Eutrema salsugineum
TPR.G28611 Trifolium pratense
TPR.G30666 Trifolium pratense
TPR.G30683 Trifolium pratense
TWI73G0966 Tripterygium wilfordii
unitig_736.g22488 Utricularia gibba
vmacro15315 Vaccinium macrocarpon
VMungo1215G0587 Vigna mungo
Zm00001eb168810 Zea mays

User provided reference genes

Program Settings