Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p10240 Brassica napus
Aa31LG1G14460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis
Actinidia22885 Actinidia chinensis
Actinidia32993 Actinidia chinensis
Ah.10g026930 Amaranthus hybridus
AL8G45680 Arabidopsis lyrata
Aqoxy6G01559 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2CLZ47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea
AT5G65960 Arabidopsis thaliana
ATR0807G113 Amborella trichopoda
Atru.chr10.1816 Acer truncatum
Atru.chr10.1831 Acer truncatum
Atru.chr3.32 Acer truncatum
Atru.chr3.33 Acer truncatum
Atru.chr3.37 Acer truncatum
AUR62006055 Chenopodium quinoa
AUR62035574 Chenopodium quinoa
BcaB04g20132 Brassica carinata
BcaC04g23101 Brassica carinata
BolC9t54105H Brassica oleracea
BraA09t36669Z Brassica rapa
C09p12150 Brassica napus
CAN.G647.4 Capsicum annuum
CANSAT21G0416 Cannabis sativa
CARHR257450 Cardamine hirsuta
CARHR281800 Cardamine hirsuta
CARHR281810 Cardamine hirsuta
Carub.0008s2856 Capsella rubella
Ca_02840_v3 Cicer arietinum L.
CBR_g24177 Chara braunii
Cc07_g12070 Coffea canephora
CDE04G0629 Ceratophyllum demersum
CDE04G2304 Ceratophyllum demersum
CDE07G1230 Ceratophyllum demersum
Cfa007104 Carpinus fangiana
Ciclev10025602m.g Citrus clementina
CiPaw.07G000800 Carya illinoinensis
ClCG04G005010 Citrullus lanatus
COL.COLO4_34271 Corchorus olitorius
Cpa.g.sc91.49 Carica papaya
Cre06.g258150 Chlamydomonas reinhardtii
CsaV3_4G027660 Cucumis sativus L.
CSS0007723 Camellia sinensis var. sinensis
DCAR_024399 Daucus carota
Dinv28304 Davidia involucrata
Dinv40206 Davidia involucrata
Duzib106G1274 Durio zibethinus
ECA240G4103 Erigeron canadensis
EL10Ac3g05234 Beta vulgaris
Eucgr.I02210 Eucalyptus grandis
FAN19G1207 Fragaria x ananassa
FAN23G1121 Fragaria x ananassa
FAN23G2177 Fragaria x ananassa
FAN26G2552 Fragaria x ananassa
FAN28G2129 Fragaria x ananassa
FvH4_1g10130 Fragaria vesca
Glyma.09G196600 Glycine max
Glyma.16G112300 Glycine max
Gohir.A02G055800 Gossypium hirsutum
Gohir.A02G179000 Gossypium hirsutum
Gohir.D02G061000 Gossypium hirsutum
Gohir.D03G000700 Gossypium hirsutum
Gorai.003G001100 Gossypium raimondii
Gorai.005G068600 Gossypium raimondii
GSVIVG01022308001 Vitis vinifera
HanXRQChr10g0316221 Helianthus annuus
HanXRQChr13g0388301 Helianthus annuus
HanXRQChr13g0388311 Helianthus annuus
Haze_03636 Corylus avellana
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla
HPP92_007280 Vanilla planifolia
Hund21384 Selenicereus undatus
Lalb_Chr05g0214931 Lupinus albus
Lj2C503G0 Lonicera japonica
Lj3g0020964 Lotus japonicus
Lj4g0017944 Lotus japonicus
Lsat_1_v5_gn_2_73561 Lactuca sativa
Manes.01G157000 Manihot esculenta
Manes.02G115500 Manihot esculenta
Mapoly0024s0125 Marchantia polymorpha
MBI13_g20494_MAGBIO Magnolia biondii
MBI15_g18235_MAGBIO Magnolia biondii
MCO09G766 Micromonas commoda
MD02G1109300 Malus domestica
MD02G1111600 Malus domestica
MD02G1112100 Malus domestica
MD02G1112300 Malus domestica
MD02G1112600 Malus domestica
MD02G1113000 Malus domestica
MD02G1113100 Malus domestica
MD15G1228500 Malus domestica
Medtr8g073110 Medicago truncatula
MELO3C026343.2 Cucumis melo
Migut.B01487 Erythranthe guttata
MSTRG.17107 Avicennia marina
Nitab4.5_0000495g0010 Nicotiana tabacum
Nitab4.5_0004269g0070 Nicotiana tabacum
Nn5g31026 Nelumbo nucifera
Oeu002901.1 Olea europaea
Oeu037412.2 Olea europaea
Os04g0584800 Oryza sativa ssp. japonica
Peaxi162Scf00920g00114 Petunia axillaris
PGR119G1257 Punica granatum
PGSC0003DMG400018667 Solanum tuberosum
Phvul.010G020700 Phaseolus vulgaris
Potri.002G177100 Populus trichocarpa
Potri.007G064500 Populus trichocarpa
Pp3c17_5460 Physcomitrium patens
Prupe.7G185600 Prunus persica
Psat0s3210g0040 Pisum sativum
Psat4g105800 Pisum sativum
PSO170G5246 Papaver somniferum
QL11p035166 Quercus lobata
RcHm_v2.0_Chr2g0096901 Rosa chinensis
Rhsim10G0191900 Rhododendron simsii
Sabra02G0136200 Salix brachista
SalBow5G3763 Salvia bowleyana
Sc05g0009010 Simmondsia chinensis
Sed0024004 Sechium edule
Sed0027663 Sechium edule
SEGI_13138 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13577 Striga asiatica
SGA_v2.0_scaffold52G19267 Striga asiatica
SGA_v2.0_scaffold578G53029 Striga asiatica
SMO147G0325 Selaginella moellendorffii
Solyc03g032050.4 Solanum lycopersicum
Sopen03g005900 Solanum pennellii
Sp2g30730 Schrenkiella parvula
TAR381G0383 Trochodendron aralioides
TAR628G0962 Trochodendron aralioides
THA.LOC104826450 Tarenaya hassleriana
Thecc.01G002600 Theobroma cacao
Thhalv10004346m.g Eutrema salsugineum
TPR.G33051 Trifolium pratense
TWI53G0851 Tripterygium wilfordii
unitig_26.g8860 Utricularia gibba
vmacro20612 Vaccinium macrocarpon
VMungo0331G1669 Vigna mungo
Zm00001eb072790 Zea mays
Zm00001eb338840 Zea mays
Zm00001eb355160 Zea mays

User provided reference genes

Program Settings