Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p27880 Brassica napus
Aa31LG3G17630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis
Actinidia28057 Actinidia chinensis
Ah.01g009580 Amaranthus hybridus
Ah.01g009610 Amaranthus hybridus
AL6G19780 Arabidopsis lyrata
Aqoxy6G00803 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea
AT5G09390 Arabidopsis thaliana
ATR0753G166 Amborella trichopoda
Atru.chr5.2124 Acer truncatum
AUR62010122 Chenopodium quinoa
AUR62013118 Chenopodium quinoa
BcaB08g37209 Brassica carinata
BcaC05g24776 Brassica carinata
BolC5t29476H Brassica oleracea
BolC7t41892H Brassica oleracea
BolC9t59557H Brassica oleracea
BraA08t32917Z Brassica rapa
BraA10t44837Z Brassica rapa
C07p13900 Brassica napus
C09p67980 Brassica napus
CAN.G274.6 Capsicum annuum
CANSAT11G0061 Cannabis sativa
CARHR204020 Cardamine hirsuta
Carub.0006s0794 Capsella rubella
Ca_00133_v3 Cicer arietinum L.
CBR_g31506 Chara braunii
Cc02_g21590 Coffea canephora
CDE10G0645 Ceratophyllum demersum
CDE10G1193 Ceratophyllum demersum
Cfa005605 Carpinus fangiana
Ciclev10025761m.g Citrus clementina
CiPaw.06G153000 Carya illinoinensis
ClCG09G015370 Citrullus lanatus
COL.COLO4_15286 Corchorus olitorius
COL.COLO4_24958 Corchorus olitorius
Cpa.g.sc49.24 Carica papaya
Cre04.g221350 Chlamydomonas reinhardtii
Cre06.g299450 Chlamydomonas reinhardtii
CsaV3_7G006460 Cucumis sativus L.
CSS0034779 Camellia sinensis var. sinensis
DCAR_021855 Daucus carota
Dinv07233 Davidia involucrata
Dinv09034 Davidia involucrata
Dinv24195 Davidia involucrata
Duzib132G0770 Durio zibethinus
Duzib248G0633 Durio zibethinus
ECA234G4021 Erigeron canadensis
EL10Ac9g21471 Beta vulgaris
Eucgr.I02666 Eucalyptus grandis
FAN04G0403 Fragaria x ananassa
FAN07G1886 Fragaria x ananassa
FAN08G0200 Fragaria x ananassa
FAN08G2142 Fragaria x ananassa
FAN12G0625 Fragaria x ananassa
FAN17G2803 Fragaria x ananassa
FAN18G1425 Fragaria x ananassa
FAN21G1455 Fragaria x ananassa
FvH4_4g13240 Fragaria vesca
FvH4_5g07000 Fragaria vesca
Glyma.08G179200 Glycine max
Glyma.15G053300 Glycine max
Gohir.A03G173700 Gossypium hirsutum
Gohir.A13G067000 Gossypium hirsutum
Gohir.D02G196800 Gossypium hirsutum
Gohir.D13G054600 Gossypium hirsutum
Gorai.005G219800 Gossypium raimondii
Gorai.013G061400 Gossypium raimondii
GSVIVG01029180001 Vitis vinifera
HanXRQChr16g0514321 Helianthus annuus
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla
HPP92_013085 Vanilla planifolia
HPP92_013108 Vanilla planifolia
Hund00058 Selenicereus undatus
Hund06385 Selenicereus undatus
Lalb_Chr20g0123041 Lupinus albus
Lj1g0016172 Lotus japonicus
Lj5A239G83 Lonicera japonica
Lj6g0025255 Lotus japonicus
Lsat_1_v5_gn_1_35040 Lactuca sativa
Lsat_1_v5_gn_4_130641 Lactuca sativa
Lsat_1_v5_gn_4_93920 Lactuca sativa
Lsat_1_v5_gn_5_107300 Lactuca sativa
Lsat_1_v5_gn_5_14961 Lactuca sativa
Lsat_1_v5_gn_5_82561 Lactuca sativa
Manes.06G012400 Manihot esculenta
Mapoly0041s0053 Marchantia polymorpha
MBI02_g08724_MAGBIO Magnolia biondii
MD05G1045100 Malus domestica
MD14G1166200 Malus domestica
Medtr2g008810 Medicago truncatula
Medtr5g017190 Medicago truncatula
MELO3C018646.2 Cucumis melo
Migut.B00612 Erythranthe guttata
MSTRG.20297 Avicennia marina
Nitab4.5_0000480g0020 Nicotiana tabacum
Nitab4.5_0008051g0010 Nicotiana tabacum
Nn5g30124 Nelumbo nucifera
Oeu011769.5 Olea europaea
Oeu047361.1 Olea europaea
Os09g0372400 Oryza sativa ssp. japonica
Peaxi162Scf00152g01023 Petunia axillaris
Peaxi162Scf00152g01024 Petunia axillaris
PGR142G3166 Punica granatum
PGSC0003DMG400011507 Solanum tuberosum
Phvul.006G206700 Phaseolus vulgaris
Potri.001G205700 Populus trichocarpa
Potri.003G023700 Populus trichocarpa
Pp3c22_4170 Physcomitrium patens
PRCOL_00000241 Prasinoderma coloniale
Prupe.5G160300 Prunus persica
Prupe.8G061500 Prunus persica
Psat1g216680 Pisum sativum
PSO541G0435 Papaver somniferum
PSO781G0052 Papaver somniferum
QL11p020696 Quercus lobata
RcHm_v2.0_Chr7g0191681 Rosa chinensis
RcHm_v2.0_Chr7g0224681 Rosa chinensis
Rhsim05G0107500 Rhododendron simsii
Rhsim05G0107600 Rhododendron simsii
Sabra01G0158000 Salix brachista
Sabra03G0014800 Salix brachista
SalBow5G0436 Salvia bowleyana
SalBow5G1137 Salvia bowleyana
Sc20g0002060 Simmondsia chinensis
Sed0011642 Sechium edule
SEGI_39436 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26298 Striga asiatica
SMO356G0631 Selaginella moellendorffii
Solyc04g009060.4 Solanum lycopersicum
Sopen04g004240 Solanum pennellii
Sp6g33940 Schrenkiella parvula
TAR114G0002 Trochodendron aralioides
THA.LOC104818438 Tarenaya hassleriana
Thecc.02G139100 Theobroma cacao
Thecc.06G050700 Theobroma cacao
Thhalv10013574m.g Eutrema salsugineum
TPR.G21754 Trifolium pratense
TPR.G9514 Trifolium pratense
TWI59G1067 Tripterygium wilfordii
vmacro19928 Vaccinium macrocarpon
VMungo0540G0644 Vigna mungo
VMungo1383G0650 Vigna mungo
VMungo1383G1566 Vigna mungo
VMungo1383G1991 Vigna mungo
Zm00001eb311320 Zea mays

User provided reference genes

Program Settings