Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p18870 Brassica napus
Aa31LG2G11270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis
Actinidia01657 Actinidia chinensis
Actinidia22849 Actinidia chinensis
Actinidia27722 Actinidia chinensis
AL1G67180 Arabidopsis lyrata
Aqoxy1G02435 Aquilegia oxysepala
Aqoxy2G02599 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea
AT1G57600 Arabidopsis thaliana
ATR0730G180 Amborella trichopoda
Atru.chr12.1512 Acer truncatum
AUR62014845 Chenopodium quinoa
AUR62017041 Chenopodium quinoa
BcaB07g31145 Brassica carinata
BcaC04g22085 Brassica carinata
BolC9t55284H Brassica oleracea
BraA09t37507Z Brassica rapa
C09p23650 Brassica napus
CAN.G1164.35 Capsicum annuum
CAN.G1715.7 Capsicum annuum
CAN.G756.6 Capsicum annuum
CANSAT56G2810 Cannabis sativa
CARHR054720 Cardamine hirsuta
Carub.0002s0703 Capsella rubella
Ca_17455_v3 Cicer arietinum L.
CBR_g16989 Chara braunii
CBR_g72775 Chara braunii
Cc02_g36050 Coffea canephora
Cc02_g36100 Coffea canephora
CDE04G1277 Ceratophyllum demersum
Cfa022844 Carpinus fangiana
Ciclev10028175m.g Citrus clementina
CiPaw.01G000500 Carya illinoinensis
ClCG03G002030 Citrullus lanatus
COL.COLO4_28214 Corchorus olitorius
Cpa.g.sc46.2 Carica papaya
Cpa.g.sc46.4 Carica papaya
Cre14.g617150 Chlamydomonas reinhardtii
CsaV3_6G013140 Cucumis sativus L.
CSS0020926 Camellia sinensis var. sinensis
CSS0020951 Camellia sinensis var. sinensis
DCAR_006591 Daucus carota
DCAR_032148 Daucus carota
Dinv22420 Davidia involucrata
Dinv24526 Davidia involucrata
Duzib114G0072 Durio zibethinus
ECA234G3247 Erigeron canadensis
EL10Ac8g20414 Beta vulgaris
Eucgr.I02672 Eucalyptus grandis
FAN01G0279 Fragaria x ananassa
FAN03G1290 Fragaria x ananassa
FAN06G2997 Fragaria x ananassa
FAN10G2429 Fragaria x ananassa
FAN19G1386 Fragaria x ananassa
FAN19G1644 Fragaria x ananassa
FAN23G0202 Fragaria x ananassa
FAN23G1974 Fragaria x ananassa
FvH4_7g05560 Fragaria vesca
Glyma.10G273100 Glycine max
Glyma.20G116900 Glycine max
Gohir.A13G003700 Gossypium hirsutum
Gohir.D13G003600 Gossypium hirsutum
Gorai.013G003500 Gossypium raimondii
GSVIVG01002014001 Vitis vinifera
GSVIVG01004371001 Vitis vinifera
GSVIVG01006954001 Vitis vinifera
GSVIVG01007210001 Vitis vinifera
GSVIVG01007211001 Vitis vinifera
GSVIVG01007430001 Vitis vinifera
HanXRQChr11g0327151 Helianthus annuus
HanXRQChr14g0439781 Helianthus annuus
Haze_12430 Corylus avellana
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla
HPP92_023772 Vanilla planifolia
Hund05397 Selenicereus undatus
Lalb_Chr04g0254641 Lupinus albus
Lj4g0015757 Lotus japonicus
Lj5C315T9 Lonicera japonica
Lj5g0020513 Lotus japonicus
Lj9A238G55 Lonicera japonica
Lsat_1_v5_gn_5_7121 Lactuca sativa
Lsat_1_v5_gn_8_74721 Lactuca sativa
Lsat_1_v5_gn_8_74741 Lactuca sativa
Manes.08G106500 Manihot esculenta
Mapoly0050s0014 Marchantia polymorpha
MBI07_g39749_MAGBIO Magnolia biondii
MBI07_g39750_MAGBIO Magnolia biondii
MCO11G558 Micromonas commoda
MD08G1246100 Malus domestica
MD15G1441300 Malus domestica
Medtr1g110490 Medicago truncatula
MELO3C019579.2 Cucumis melo
Migut.B00894 Erythranthe guttata
MSTRG.16439 Avicennia marina
Nitab4.5_0000081g0190 Nicotiana tabacum
Nitab4.5_0002303g0020 Nicotiana tabacum
Nn7g38157 Nelumbo nucifera
Oeu061912.1 Olea europaea
Os05g0144000 Oryza sativa ssp. japonica
Peaxi162Scf00212g00515 Petunia axillaris
PGR004G0062 Punica granatum
PGR117G0001 Punica granatum
PGSC0003DMG400001886 Solanum tuberosum
Phvul.007G028500 Phaseolus vulgaris
Potri.013G000600 Populus trichocarpa
Pp3c2_38270 Physcomitrium patens
PRCOL_00000039 Prasinoderma coloniale
Prupe.1G583400 Prunus persica
Psat6g226240 Pisum sativum
PSO170G1924 Papaver somniferum
PSO357G0276 Papaver somniferum
QL03p011256 Quercus lobata
QL03p011287 Quercus lobata
RcHm_v2.0_Chr1g0332651 Rosa chinensis
Rhsim01G0213000 Rhododendron simsii
Rhsim04G0165200 Rhododendron simsii
Rhsim05G0125000 Rhododendron simsii
Sabra13G0000500 Salix brachista
SalBow3G2171 Salvia bowleyana
SalBow5G4822 Salvia bowleyana
Sc05g0003730 Simmondsia chinensis
Sc05g0004380 Simmondsia chinensis
Sed0004859 Sechium edule
SEGI_04903 Sequoiadendron giganteum
SGA_v2.0_scaffold279G46769 Striga asiatica
SHI20227 Sapria himalayana
SHI20228 Sapria himalayana
SMO145G0201 Selaginella moellendorffii
Solyc04g055190.4 Solanum lycopersicum
Sopen04g025050 Solanum pennellii
Sp2g05910 Schrenkiella parvula
SpUn0028_0030 Schrenkiella parvula
TAR636G2920 Trochodendron aralioides
THA.LOC104816839 Tarenaya hassleriana
Thecc.05G331000 Theobroma cacao
Thhalv10023409m.g Eutrema salsugineum
TPR.G18815 Trifolium pratense
TPR.G33173 Trifolium pratense
TWI60G1029 Tripterygium wilfordii
unitig_22.g6127 Utricularia gibba
vmacro19800 Vaccinium macrocarpon
vmacro22232 Vaccinium macrocarpon
VMungo0720G1588 Vigna mungo
Zm00001eb108680 Zea mays

User provided reference genes

Program Settings