Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09660 Brassica napus
Aa31LG9G14570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis
Actinidia24924 Actinidia chinensis
Ah.11g050220 Amaranthus hybridus
AL6G31360 Arabidopsis lyrata
Aqoxy5G00398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea
AT3G26135 Arabidopsis thaliana
AT5G19840 Arabidopsis thaliana
ATR0665G047 Amborella trichopoda
Atru.chr5.1521 Acer truncatum
AUR62011971 Chenopodium quinoa
AUR62032283 Chenopodium quinoa
BcaB01g04828 Brassica carinata
BcaB01g04840 Brassica carinata
BcaB01g04842 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02070 Brassica napus
BolC2t06985H Brassica oleracea
BolC3t13593H Brassica oleracea
BraA03t10282Z Brassica rapa
C03p11220 Brassica napus
CAN.G433.6 Capsicum annuum
CANSAT25G0263 Cannabis sativa
CARHR193040 Cardamine hirsuta
Carub.0006s1818 Capsella rubella
Carub.0006s1819 Capsella rubella
Ca_09727_v3 Cicer arietinum L.
Cc00_g12310 Coffea canephora
Cc01_g19000 Coffea canephora
CDE02G4319 Ceratophyllum demersum
Cfa006202 Carpinus fangiana
Ciclev10019332m.g Citrus clementina
CiPaw.07G086800 Carya illinoinensis
ClCG09G007410 Citrullus lanatus
COL.COLO4_09187 Corchorus olitorius
Cpa.g.sc52.118 Carica papaya
Cpa.g.sc52.119 Carica papaya
Cre09.g407110 Chlamydomonas reinhardtii
CsaV3_7G027890 Cucumis sativus L.
CSS0038001 Camellia sinensis var. sinensis
CSS0039116 Camellia sinensis var. sinensis
DCAR_002701 Daucus carota
Dinv22502 Davidia involucrata
Dinv32884 Davidia involucrata
Duzib133G0140 Durio zibethinus
Duzib211G0075 Durio zibethinus
ECA236G1829 Erigeron canadensis
EL10Ac5g10492 Beta vulgaris
Eucgr.K03324 Eucalyptus grandis
FAN15G0608 Fragaria x ananassa
FAN20G1006 Fragaria x ananassa
FAN24G2655 Fragaria x ananassa
FAN27G2645 Fragaria x ananassa
FvH4_2g22940 Fragaria vesca
Glyma.02G144267 Glycine max
Glyma.02G144333 Glycine max
Glyma.10G029800 Glycine max
Gohir.A08G063900 Gossypium hirsutum
Gohir.D08G072400 Gossypium hirsutum
Gorai.004G076600 Gossypium raimondii
GSVIVG01003120001 Vitis vinifera
GSVIVG01003121001 Vitis vinifera
HanXRQChr04g0113941 Helianthus annuus
Haze_04642 Corylus avellana
HPP92_022056 Vanilla planifolia
HPP92_022057 Vanilla planifolia
HPP92_027617 Vanilla planifolia
Hund09547 Selenicereus undatus
Lalb_Chr02g0142521 Lupinus albus
Lalb_Chr06g0162781 Lupinus albus
Lj2A1164T58 Lonicera japonica
Lj5g0010127 Lotus japonicus
Lsat_1_v5_gn_8_93980 Lactuca sativa
Manes.01G203900 Manihot esculenta
Manes.05G081900 Manihot esculenta
Mapoly0003s0071 Marchantia polymorpha
MBI11_g08089_MAGBIO Magnolia biondii
MCO06G041 Micromonas commoda
MCO07G231 Micromonas commoda
MCO13G014 Micromonas commoda
MD03G1258000 Malus domestica
MD03G1258100 Malus domestica
MD11G1278700 Malus domestica
Medtr1g071300 Medicago truncatula
MELO3C015807.2 Cucumis melo
Migut.D00356 Erythranthe guttata
Nitab4.5_0000459g0120 Nicotiana tabacum
Nitab4.5_0004115g0020 Nicotiana tabacum
Nn1g02459 Nelumbo nucifera
Oeu014736.1 Olea europaea
Os01g0773200 Oryza sativa ssp. japonica
Peaxi162Scf00259g00051 Petunia axillaris
PGR044G1133 Punica granatum
PGSC0003DMG400019309 Solanum tuberosum
PGSC0003DMG400019310 Solanum tuberosum
Phvul.007G175000 Phaseolus vulgaris
Potri.002G047875 Populus trichocarpa
Potri.005G215200 Populus trichocarpa
Pp3c26_13750 Physcomitrium patens
Prupe.8G234700 Prunus persica
Psat6g058480 Pisum sativum
PSO210G1189 Papaver somniferum
PSO339G3362 Papaver somniferum
PSO832G2480 Papaver somniferum
QL01p000805 Quercus lobata
QL12p042266 Quercus lobata
RcHm_v2.0_Chr2g0095571 Rosa chinensis
RcHm_v2.0_Chr2g0171851 Rosa chinensis
RcHm_v2.0_Chr3g0456061 Rosa chinensis
RcHm_v2.0_Chr4g0407971 Rosa chinensis
RcHm_v2.0_Chr6g0289901 Rosa chinensis
RcHm_v2.0_Chr6g0289911 Rosa chinensis
RcHm_v2.0_Chr6g0289951 Rosa chinensis
RcHm_v2.0_Chr7g0198731 Rosa chinensis
Rhsim01G0272000 Rhododendron simsii
Sabra02G0039000 Salix brachista
Sabra05G0164500 Salix brachista
Sc05g0001300 Simmondsia chinensis
Sc05g0001310 Simmondsia chinensis
Sed0003895 Sechium edule
Sed0016751 Sechium edule
SEGI_08858 Sequoiadendron giganteum
SEGI_30706 Sequoiadendron giganteum
SEGI_31795 Sequoiadendron giganteum
SEGI_33448 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00534 Striga asiatica
SMO343G0029 Selaginella moellendorffii
SMO367G0146 Selaginella moellendorffii
Solyc09g065690.4 Solanum lycopersicum
Sopen09g027430 Solanum pennellii
Sp6g24570 Schrenkiella parvula
TAR636G0163 Trochodendron aralioides
TAR636G2873 Trochodendron aralioides
Thecc.01G271500 Theobroma cacao
Thhalv10013262m.g Eutrema salsugineum
TPR.G21102 Trifolium pratense
TPR.G21665 Trifolium pratense
TPR.G29273 Trifolium pratense
TPR.G34891 Trifolium pratense
TWI12G0244 Tripterygium wilfordii
TWI75G1276 Tripterygium wilfordii
unitig_0.g1132 Utricularia gibba
vmacro14887 Vaccinium macrocarpon
VMungo0251G2179 Vigna mungo
VMungo0720G1640 Vigna mungo
VMungo0720G1803 Vigna mungo
Zm00001eb370120 Zea mays

User provided reference genes

Program Settings