Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06810 Brassica napus
A08p18600 Brassica napus
Aa31LG2G18860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis
Actinidia13302 Actinidia chinensis
Actinidia13417 Actinidia chinensis
Ah.06g191340 Amaranthus hybridus
AL7G20600 Arabidopsis lyrata
Aqoxy3G03669 Aquilegia oxysepala
Aqoxy7G00181 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea
AT4G31460 Arabidopsis thaliana
ATR0580G184 Amborella trichopoda
Atru.chr7.2646 Acer truncatum
AUR62027459 Chenopodium quinoa
AUR62027460 Chenopodium quinoa
BcaB03g12697 Brassica carinata
BcaB03g12699 Brassica carinata
BcaC01g01087 Brassica carinata
BcaC01g01097 Brassica carinata
BcaC09g51928 Brassica carinata
BcaNung01521 Brassica carinata
BcaNung04139 Brassica carinata
BcaNung04586 Brassica carinata
BolC1t00736H Brassica oleracea
BolC3t21107H Brassica oleracea
BraA01t00633Z Brassica rapa
BraA08t33823Z Brassica rapa
C01p07550 Brassica napus
C03p87960 Brassica napus
C03p88060 Brassica napus
CAN.G886.9 Capsicum annuum
CANSAT25G3538 Cannabis sativa
CANSAT64G0033 Cannabis sativa
CARHR239350 Cardamine hirsuta
Carub.0007s0909 Capsella rubella
Ca_12771_v3 Cicer arietinum L.
Ca_29761_v3 Cicer arietinum L.
CBR_g8145 Chara braunii
Cc08_g08560 Coffea canephora
CDE02G4585 Ceratophyllum demersum
CDE05G0021 Ceratophyllum demersum
Cfa013273 Carpinus fangiana
Cfa025056 Carpinus fangiana
Ciclev10009422m.g Citrus clementina
CiPaw.01G062200 Carya illinoinensis
CiPaw.07G212300 Carya illinoinensis
CiPaw.08G019900 Carya illinoinensis
ClCG10G000990 Citrullus lanatus
COL.COLO4_19031 Corchorus olitorius
Cpa.g.sc6.221 Carica papaya
CsaV3_3G001030 Cucumis sativus L.
CSS0002597 Camellia sinensis var. sinensis
DCAR_007697 Daucus carota
Dinv30242 Davidia involucrata
Duzib168G2230 Durio zibethinus
Duzib187G1289 Durio zibethinus
ECA248G0122 Erigeron canadensis
ECA248G2823 Erigeron canadensis
EL10Ac2g04836 Beta vulgaris
EL10Ac4g08846 Beta vulgaris
Eucgr.H01931 Eucalyptus grandis
FAN06G0478 Fragaria x ananassa
FvH4_2g36661 Fragaria vesca
FvH4_7g03740 Fragaria vesca
Glyma.11G153169 Glycine max
Glyma.12G071700 Glycine max
Gohir.A07G060900 Gossypium hirsutum
Gohir.D07G065600 Gossypium hirsutum
Gorai.001G069100 Gossypium raimondii
GSVIVG01009932001 Vitis vinifera
HanXRQChr01g0029381 Helianthus annuus
HanXRQChr11g0341541 Helianthus annuus
Haze_21744 Corylus avellana
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla
HPP92_011116 Vanilla planifolia
HPP92_011121 Vanilla planifolia
Hund06848 Selenicereus undatus
Hund22233 Selenicereus undatus
Lalb_Chr18g0045061 Lupinus albus
Lj3g0002799 Lotus japonicus
Lj3g0015990 Lotus japonicus
Lj7C709T7 Lonicera japonica
Lsat_1_v5_gn_1_49060 Lactuca sativa
Manes.15G137600 Manihot esculenta
Manes.17G086700 Manihot esculenta
Mapoly0026s0002 Marchantia polymorpha
MBI16_g41808_MAGBIO Magnolia biondii
MD08G1128100 Malus domestica
MD15G1107600 Malus domestica
Medtr1g007480 Medicago truncatula
MELO3C013792.2 Cucumis melo
Migut.A00251 Erythranthe guttata
MSTRG.11721 Avicennia marina
Nitab4.5_0000250g0160 Nicotiana tabacum
Nitab4.5_0002393g0070 Nicotiana tabacum
Nn2g12690 Nelumbo nucifera
Oeu031567.1 Olea europaea
Oeu033208.1 Olea europaea
Os07g0544900 Oryza sativa ssp. japonica
Peaxi162Scf00105g00510 Petunia axillaris
PGR044G1665 Punica granatum
PGSC0003DMG400013829 Solanum tuberosum
Phvul.011G072600 Phaseolus vulgaris
Potri.018G006900 Populus trichocarpa
Pp3c2_35700 Physcomitrium patens
PRCOL_00000323 Prasinoderma coloniale
Prupe.1G459900 Prunus persica
Psat6g036480 Pisum sativum
PSO063G2087 Papaver somniferum
PSO063G4606 Papaver somniferum
PSO170G1562 Papaver somniferum
PSO782G1312 Papaver somniferum
QL12p025158 Quercus lobata
RcHm_v2.0_Chr6g0305011 Rosa chinensis
Rhsim04G0150100 Rhododendron simsii
Sabra18G0014600 Salix brachista
Sc24g0001980 Simmondsia chinensis
Sed0019969 Sechium edule
SEGI_29047 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43318 Striga asiatica
SGA_v2.0_scaffold27G11528 Striga asiatica
SHI04252 Sapria himalayana
SHI04272 Sapria himalayana
SMO367G1088 Selaginella moellendorffii
Solyc08g065760.3 Solanum lycopersicum
Solyc10g038060.2 Solanum lycopersicum
Sopen08g019440 Solanum pennellii
Sopen10g011390 Solanum pennellii
Sopen10g033590 Solanum pennellii
Sp7g29320 Schrenkiella parvula
TAR383G0773 Trochodendron aralioides
TAR383G0873 Trochodendron aralioides
TAR625G0147 Trochodendron aralioides
THA.LOC104803875 Tarenaya hassleriana
Thecc.09G007400 Theobroma cacao
Thhalv10026230m.g Eutrema salsugineum
TPR.G24523 Trifolium pratense
TWI34G1428 Tripterygium wilfordii
TWI63G0658 Tripterygium wilfordii
unitig_46.g18530 Utricularia gibba
vmacro05353 Vaccinium macrocarpon
vmacro08640 Vaccinium macrocarpon
VMungo1127G2243 Vigna mungo
Zm00001eb106440 Zea mays
Zm00001eb323470 Zea mays

User provided reference genes

Program Settings