Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p24970 Brassica napus
Aa31LG3G14420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis
Actinidia14945 Actinidia chinensis
Actinidia15243 Actinidia chinensis
Actinidia36689 Actinidia chinensis
Ah.02g128040 Amaranthus hybridus
AL6G23850 Arabidopsis lyrata
Aqoxy3G04360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea
AT5G13240 Arabidopsis thaliana
ATR0315G127 Amborella trichopoda
Atru.chr11.981 Acer truncatum
AUR62014195 Chenopodium quinoa
AUR62041239 Chenopodium quinoa
BcaC04g19133 Brassica carinata
BcaNung01872 Brassica carinata
BolC2t06543H Brassica oleracea
BolC9t59224H Brassica oleracea
BraA10t44559Z Brassica rapa
C02p06000 Brassica napus
C09p63840 Brassica napus
CAN.G1693.8 Capsicum annuum
CANSAT01G2336 Cannabis sativa
CARHR200210 Cardamine hirsuta
Carub.0006s1141 Capsella rubella
Ca_11105_v3 Cicer arietinum L.
Cc11_g09090 Coffea canephora
CDE02G3434 Ceratophyllum demersum
CDE09G0103 Ceratophyllum demersum
Cfa008573 Carpinus fangiana
Cfa026650 Carpinus fangiana
Ciclev10016597m.g Citrus clementina
CiPaw.05G247000 Carya illinoinensis
CiPaw.06G013900 Carya illinoinensis
ClCG05G022260 Citrullus lanatus
COL.COLO4_10156 Corchorus olitorius
Cpa.g.sc65.108 Carica papaya
Cre08.g364250 Chlamydomonas reinhardtii
CsaV3_5G034860 Cucumis sativus L.
CSS0010746 Camellia sinensis var. sinensis
CSS0013064 Camellia sinensis var. sinensis
CSS0013445 Camellia sinensis var. sinensis
CSS0024462 Camellia sinensis var. sinensis
CSS0029214 Camellia sinensis var. sinensis
CSS0034104 Camellia sinensis var. sinensis
CSS0040756 Camellia sinensis var. sinensis
CSS0044245 Camellia sinensis var. sinensis
DCAR_030202 Daucus carota
Dinv05881 Davidia involucrata
Dinv16188 Davidia involucrata
Duzib133G0650 Durio zibethinus
Duzib138G1958 Durio zibethinus
ECA233G6099 Erigeron canadensis
EL10Ac6g14241 Beta vulgaris
Eucgr.G02212 Eucalyptus grandis
FAN07G2072 Fragaria x ananassa
FAN12G1431 Fragaria x ananassa
FAN12G3562 Fragaria x ananassa
FAN17G1326 Fragaria x ananassa
FAN17G1863 Fragaria x ananassa
FAN22G0152 Fragaria x ananassa
FvH4_4g26160 Fragaria vesca
Glyma.10G266000 Glycine max
Glyma.20G124600 Glycine max
Gohir.A07G173000 Gossypium hirsutum
Gohir.A12G057400 Gossypium hirsutum
Gohir.D01G091150 Gossypium hirsutum
Gohir.D07G180500 Gossypium hirsutum
Gohir.D12G057200 Gossypium hirsutum
Gorai.001G193400 Gossypium raimondii
Gorai.001G201700 Gossypium raimondii
Gorai.001G223500 Gossypium raimondii
Gorai.008G060200 Gossypium raimondii
Gorai.010G145600 Gossypium raimondii
GSVIVG01011786001 Vitis vinifera
HanXRQChr07g0189871 Helianthus annuus
HanXRQChr08g0212881 Helianthus annuus
Haze_11044 Corylus avellana
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla
HPP92_015449 Vanilla planifolia
Hund24992 Selenicereus undatus
Lalb_Chr06g0165661 Lupinus albus
Lj5g0002039 Lotus japonicus
Lj6C749G10 Lonicera japonica
Lsat_1_v5_gn_8_42761 Lactuca sativa
Manes.06G062200 Manihot esculenta
Mapoly0012s0169 Marchantia polymorpha
MBI07_g18719_MAGBIO Magnolia biondii
MCO09G688 Micromonas commoda
MD13G1028600 Malus domestica
MD16G1031300 Malus domestica
Medtr1g108610 Medicago truncatula
MELO3C012297.2 Cucumis melo
Migut.L00658 Erythranthe guttata
Migut.L00755 Erythranthe guttata
MSTRG.882 Avicennia marina
Nitab4.5_0004092g0040 Nicotiana tabacum
Nitab4.5_0004692g0050 Nicotiana tabacum
Nn2g14330 Nelumbo nucifera
Nn6g34668 Nelumbo nucifera
Oeu044327.1 Olea europaea
Os04g0662900 Oryza sativa ssp. japonica
Peaxi162Scf00205g00614 Petunia axillaris
PGR119G0027 Punica granatum
PGSC0003DMG400030511 Solanum tuberosum
Phvul.007G035700 Phaseolus vulgaris
Potri.010G115800 Populus trichocarpa
Pp3c11_22300 Physcomitrium patens
Pp3c7_4620 Physcomitrium patens
PRCOL_00004209 Prasinoderma coloniale
Prupe.1G321700 Prunus persica
Psat6g222200 Pisum sativum
PSO063G1195 Papaver somniferum
PSO782G3547 Papaver somniferum
QL01p002347 Quercus lobata
RcHm_v2.0_Chr4g0433731 Rosa chinensis
Rhsim09G0068400 Rhododendron simsii
Sabra10G0085700 Salix brachista
Sabra10G0087400 Salix brachista
SalBow8G2598 Salvia bowleyana
Sc04g0005680 Simmondsia chinensis
Sed0026570 Sechium edule
SEGI_16480 Sequoiadendron giganteum
SEGI_23519 Sequoiadendron giganteum
SEGI_41622 Sequoiadendron giganteum
SGA_v2.0_scaffold38G15047 Striga asiatica
SGA_v2.0_scaffold50G18531 Striga asiatica
SHI16322 Sapria himalayana
SHI16326 Sapria himalayana
Solyc05g008400.4 Solanum lycopersicum
Sopen05g004230 Solanum pennellii
Sp6g30750 Schrenkiella parvula
TAR629G1532 Trochodendron aralioides
THA.LOC104825471 Tarenaya hassleriana
Thecc.04G114900 Theobroma cacao
Thhalv10014602m.g Eutrema salsugineum
TPR.G4886 Trifolium pratense
TWI79G0317 Tripterygium wilfordii
unitig_0.g2334 Utricularia gibba
vmacro01431 Vaccinium macrocarpon
VMungo0720G3073 Vigna mungo
Zm00001eb025950 Zea mays
Zm00001eb246210 Zea mays

User provided reference genes

Program Settings