Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12480 Brassica napus
A03p16290 Brassica napus
Aa31LG3G7640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis
Actinidia07401 Actinidia chinensis
Actinidia32663 Actinidia chinensis
AL8G25390 Arabidopsis lyrata
Aqoxy7G01513 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C3C3ER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea
AT5G51130 Arabidopsis thaliana
ATR0315G075 Amborella trichopoda
Atru.chr7.1418 Acer truncatum
AUR62008451 Chenopodium quinoa
AUR62021639 Chenopodium quinoa
BcaB05g24018 Brassica carinata
BcaC01g06076 Brassica carinata
BcaC01g06098 Brassica carinata
BcaC03g14623 Brassica carinata
BolC2t08195H Brassica oleracea
BolC3t14306H Brassica oleracea
BraA02t06311Z Brassica rapa
BraA03t10920Z Brassica rapa
C02p20580 Brassica napus
C03p19180 Brassica napus
CAN.G399.3 Capsicum annuum
CANSAT56G1645 Cannabis sativa
CANSAT56G2306 Cannabis sativa
CARHR256940 Cardamine hirsuta
Carub.0008s1117 Capsella rubella
Ca_17315_v3 Cicer arietinum L.
CBR_g687 Chara braunii
Cc06_g10130 Coffea canephora
CDE05G3470 Ceratophyllum demersum
CDE11G0552 Ceratophyllum demersum
Ciclev10009268m.g Citrus clementina
CiPaw.03G227700 Carya illinoinensis
CiPaw.05G218700 Carya illinoinensis
ClCG06G008900 Citrullus lanatus
COL.COLO4_34800 Corchorus olitorius
Cpa.g.sc40.24 Carica papaya
Cre15.g636450 Chlamydomonas reinhardtii
CsaV3_1G020790 Cucumis sativus L.
CSS0031404 Camellia sinensis var. sinensis
CSS0032398 Camellia sinensis var. sinensis
CSS0049746 Camellia sinensis var. sinensis
DCAR_028679 Daucus carota
Dinv41645 Davidia involucrata
Duzib150G1337 Durio zibethinus
ECA240G1764 Erigeron canadensis
EL10Ac8g18422 Beta vulgaris
Eucgr.C03795 Eucalyptus grandis
FAN05G4531 Fragaria x ananassa
FAN21G3257 Fragaria x ananassa
FvH4_1g05710 Fragaria vesca
FvH4_7g02480 Fragaria vesca
FvH4_7g02600 Fragaria vesca
Glyma.08G035500 Glycine max
Gohir.A07G004400 Gossypium hirsutum
Gohir.D07G007800 Gossypium hirsutum
Gorai.001G007500 Gossypium raimondii
GSVIVG01015340001 Vitis vinifera
HanXRQChr03g0061421 Helianthus annuus
HanXRQChr03g0061441 Helianthus annuus
HanXRQChr09g0239411 Helianthus annuus
Haze_02522 Corylus avellana
Haze_02523 Corylus avellana
Haze_02526 Corylus avellana
HPP92_012900 Vanilla planifolia
HPP92_012921 Vanilla planifolia
Hund26242 Selenicereus undatus
Lalb_Chr05g0223101 Lupinus albus
Lalb_Chr14g0371731 Lupinus albus
Lalb_Chr24g0397371 Lupinus albus
Lalb_Chr24g0397391 Lupinus albus
Lj4g0001585 Lotus japonicus
Lj4g0009518 Lotus japonicus
Lj7A659G31 Lonicera japonica
Lsat_1_v5_gn_7_41360 Lactuca sativa
Manes.16G112100 Manihot esculenta
Mapoly0002s0233 Marchantia polymorpha
MBI04_g02609_MAGBIO Magnolia biondii
MBI18_g34933_MAGBIO Magnolia biondii
MBI19_g24589_MAGBIO Magnolia biondii
MBI19_g24592_MAGBIO Magnolia biondii
MBI19_g42779_MAGBIO Magnolia biondii
MCO09G154 Micromonas commoda
MD02G1058100 Malus domestica
MD02G1058200 Malus domestica
MD15G1192600 Malus domestica
Medtr8g102950 Medicago truncatula
MELO3C024707.2 Cucumis melo
Migut.J01131 Erythranthe guttata
MSTRG.19566 Avicennia marina
Nitab4.5_0000066g0130 Nicotiana tabacum
Nitab4.5_0001706g0070 Nicotiana tabacum
Nitab4.5_0001706g0080 Nicotiana tabacum
Nitab4.5_0002165g0080 Nicotiana tabacum
Nitab4.5_0002165g0090 Nicotiana tabacum
Nitab4.5_0003331g0010 Nicotiana tabacum
Nn3g18146 Nelumbo nucifera
Oeu000366.2 Olea europaea
Oeu017816.1 Olea europaea
Os08g0540500 Oryza sativa ssp. japonica
Peaxi162Scf00539g00614 Petunia axillaris
PGR102G0147 Punica granatum
PGSC0003DMG400021659 Solanum tuberosum
Phvul.002G310900 Phaseolus vulgaris
Potri.018G084700 Populus trichocarpa
Pp3c17_15270 Physcomitrium patens
PRCOL_00000240 Prasinoderma coloniale
Prupe.7G224700 Prunus persica
Psat7g014440 Pisum sativum
PSO541G6366 Papaver somniferum
PSO675G4950 Papaver somniferum
QL01p004043 Quercus lobata
RcHm_v2.0_Chr2g0091361 Rosa chinensis
Rhsim03G0239000 Rhododendron simsii
Sabra18G0073100 Salix brachista
Sc08g0007770 Simmondsia chinensis
Sed0000382 Sechium edule
SEGI_33858 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09148 Striga asiatica
SGA_v2.0_scaffold22G09903 Striga asiatica
SHI02711 Sapria himalayana
SMO232G0003 Selaginella moellendorffii
SMO241G0030 Selaginella moellendorffii
Solyc05g050000.3 Solanum lycopersicum
Sopen05g028390 Solanum pennellii
Sp6g13340 Schrenkiella parvula
TAR636G2606 Trochodendron aralioides
THA.LOC104811095 Tarenaya hassleriana
Thecc.09G104800 Theobroma cacao
Thhalv10006518m.g Eutrema salsugineum
Thhalv10014188m.g Eutrema salsugineum
Thhalv10026861m.g Eutrema salsugineum
Thhalv10027230m.g Eutrema salsugineum
Thhalv10027350m.g Eutrema salsugineum
Thhalv10027410m.g Eutrema salsugineum
TPR.G23453 Trifolium pratense
TWI12G1172 Tripterygium wilfordii
unitig_748.g8737 Utricularia gibba
unitig_748.g8739 Utricularia gibba
vmacro06238 Vaccinium macrocarpon
VMungo0251G3379 Vigna mungo
Zm00001eb198370 Zea mays

User provided reference genes

Program Settings