Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08310 Brassica napus
A08p33240 Brassica napus
Aa31LG1G3000 Aethionema arabicum
Aa31LG2G8870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3108 Anthoceros agrestis
Actinidia17822 Actinidia chinensis
Actinidia26757 Actinidia chinensis
Actinidia30740 Actinidia chinensis
Ah.01g019530 Amaranthus hybridus
AL1G22930 Arabidopsis lyrata
Aqoxy214s001 Aquilegia oxysepala
Aqoxy2G00255 Aquilegia oxysepala
Aqoxy2G00971 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GI2C3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWQD3U Arachis hypogaea
AT1G11755 Arabidopsis thaliana
ATR0733G063 Amborella trichopoda
Atru.chr5.2990 Acer truncatum
AUR62011341 Chenopodium quinoa
AUR62016719 Chenopodium quinoa
AUR62032493 Chenopodium quinoa
BcaB03g13233 Brassica carinata
BcaB03g13234 Brassica carinata
BcaC05g25044 Brassica carinata
BolC8t49124H Brassica oleracea
BraA08t35243Z Brassica rapa
C08p14950 Brassica napus
CAN.G62.20 Capsicum annuum
CANSAT54G1571 Cannabis sativa
CARHR012070 Cardamine hirsuta
Carub.0001s1141 Capsella rubella
Ca_24432_v3 Cicer arietinum L.
CBR_g30112 Chara braunii
Cc02_g17750 Coffea canephora
Cc02_g20810 Coffea canephora
CDE08G1236 Ceratophyllum demersum
Ciclev10028976m.g Citrus clementina
CiPaw.05G062800 Carya illinoinensis
ClCG09G016910 Citrullus lanatus
COL.COLO4_32438 Corchorus olitorius
Cpa.g.sc62.129 Carica papaya
CsaV3_2G036400 Cucumis sativus L.
CSS0007217 Camellia sinensis var. sinensis
DCAR_022106 Daucus carota
DCAR_022108 Daucus carota
DCAR_028995 Daucus carota
Dinv23542 Davidia involucrata
Dinv42083 Davidia involucrata
Duzib248G0873 Durio zibethinus
ECA234G4136 Erigeron canadensis
ECA240G2790 Erigeron canadensis
EL10Ac9g21742 Beta vulgaris
Eucgr.F03779 Eucalyptus grandis
Eucgr.L02365 Eucalyptus grandis
FAN20G2519 Fragaria x ananassa
FAN24G2241 Fragaria x ananassa
FvH4_2g08440 Fragaria vesca
Glyma.01G233700 Glycine max
Glyma.11G009100 Glycine max
Gohir.A12G017700 Gossypium hirsutum
Gohir.A13G048800 Gossypium hirsutum
Gohir.D12G018300 Gossypium hirsutum
Gohir.D13G047300 Gossypium hirsutum
Gorai.008G018600 Gossypium raimondii
Gorai.013G052900 Gossypium raimondii
GSVIVG01031935001 Vitis vinifera
HanXRQChr10g0307261 Helianthus annuus
HanXRQChr14g0443031 Helianthus annuus
Haze_02366 Corylus avellana
Hma1.2p1_1375F.1_g278980 Hydrangea macrophylla
Hma1.2p1_1375F.1_g278990 Hydrangea macrophylla
Hma1.2p1_3179F.1_g333693 Hydrangea macrophylla
HPP92_014277 Vanilla planifolia
HPP92_024488 Vanilla planifolia
Hund06225 Selenicereus undatus
Lalb_Chr05g0211211 Lupinus albus
Lalb_Chr16g0376541 Lupinus albus
Lj5C198G20 Lonicera japonica
Lj5g0027841 Lotus japonicus
LjContig00222g0024344 Lotus japonicus
Lsat_1_v5_gn_0_28960 Lactuca sativa
Lsat_1_v5_gn_2_61580 Lactuca sativa
Lsat_1_v5_gn_5_117961 Lactuca sativa
Lsat_1_v5_gn_9_109460 Lactuca sativa
Manes.15G164800 Manihot esculenta
Manes.17G099900 Manihot esculenta
Mapoly0014s0198 Marchantia polymorpha
MBI15_g22768_MAGBIO Magnolia biondii
MCO14G143 Micromonas commoda
MD10G1078800 Malus domestica
Medtr5g007260 Medicago truncatula
Medtr5g007330 Medicago truncatula
MELO3C021891.2 Cucumis melo
Migut.B00251 Erythranthe guttata
MSTRG.16797 Avicennia marina
MSTRG.17529 Avicennia marina
Nitab4.5_0000618g0170 Nicotiana tabacum
Nitab4.5_0000959g0010 Nicotiana tabacum
Nn5g29559 Nelumbo nucifera
Oeu020768.3 Olea europaea
Os02g0197700 Oryza sativa ssp. japonica
Os03g0197000 Oryza sativa ssp. japonica
Peaxi162Scf00190g01218 Petunia axillaris
PGR119G1160 Punica granatum
PGSC0003DMG400024156 Solanum tuberosum
Phvul.002G041200 Phaseolus vulgaris
Potri.004G152800 Populus trichocarpa
Prupe.8G100600 Prunus persica
Prupe.8G100800 Prunus persica
Psat2g154960 Pisum sativum
Psat2g189320 Pisum sativum
PSO210G6102 Papaver somniferum
PSO210G6272 Papaver somniferum
QL11p042637 Quercus lobata
QL11p043149 Quercus lobata
RcHm_v2.0_Chr6g0263721 Rosa chinensis
Rhsim05G0075100 Rhododendron simsii
Rhsim11G0174600 Rhododendron simsii
SalBow5G1254 Salvia bowleyana
SalBow6G2079 Salvia bowleyana
Sc08g0000410 Simmondsia chinensis
Sed0008504 Sechium edule
SEGI_04576 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20551 Striga asiatica
SGA_v2.0_scaffold68G22950 Striga asiatica
SHI05416 Sapria himalayana
SMO351G0289 Selaginella moellendorffii
Solyc06g060810.3 Solanum lycopersicum
Sopen06g020960 Solanum pennellii
Sp1g10370 Schrenkiella parvula
TAR376G0049 Trochodendron aralioides
TAR628G0550 Trochodendron aralioides
TAR628G1407 Trochodendron aralioides
THA.LOC104818761 Tarenaya hassleriana
THA.LOC104823527 Tarenaya hassleriana
Thecc.02G124000 Theobroma cacao
Thhalv10008545m.g Eutrema salsugineum
TPR.G17161 Trifolium pratense
TPR.G17189 Trifolium pratense
TPR.G37890 Trifolium pratense
TWI31G0993 Tripterygium wilfordii
TWI75G0648 Tripterygium wilfordii
TWI79G0651 Tripterygium wilfordii
unitig_60.g25856 Utricularia gibba
vmacro02126 Vaccinium macrocarpon
vmacro17503 Vaccinium macrocarpon
vmacro17504 Vaccinium macrocarpon
VMungo1309G1500 Vigna mungo
VMungo1309G3063 Vigna mungo
Zm00001eb008090 Zea mays

User provided reference genes

Program Settings