Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11860 Brassica napus
Aa31LG6G2470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis
Actinidia07601 Actinidia chinensis
Ah.09g226960 Amaranthus hybridus
AL7G33790 Arabidopsis lyrata
Aqoxy3G03508 Aquilegia oxysepala
Aqoxy5G03189 Aquilegia oxysepala
Aqoxy5G03190 Aquilegia oxysepala
Aqoxy5G03191 Aquilegia oxysepala
Aqoxy5G03195 Aquilegia oxysepala
Aqoxy7G01840 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea
AT4G20060 Arabidopsis thaliana
ATR0037G053 Amborella trichopoda
Atru.chr10.384 Acer truncatum
Atru.chr8.666 Acer truncatum
Atru.chr8.667 Acer truncatum
AUR62012329 Chenopodium quinoa
AUR62022971 Chenopodium quinoa
BcaB03g11656 Brassica carinata
BcaB03g11657 Brassica carinata
BcaC01g00652 Brassica carinata
BcaC01g00655 Brassica carinata
BcaNung06192 Brassica carinata
BcaNung06193 Brassica carinata
BolC1t01373H Brassica oleracea
BolC3t20554H Brassica oleracea
BolC3t20555H Brassica oleracea
BraA01t01128Z Brassica rapa
C01p14060 Brassica napus
C03p82730 Brassica napus
CAN.G370.71 Capsicum annuum
CANSAT25G2352 Cannabis sativa
CARHR226870 Cardamine hirsuta
Carub.0007s2107 Capsella rubella
Ca_14567_v3 Cicer arietinum L.
Ca_14572_v3 Cicer arietinum L.
Ca_14573_v3 Cicer arietinum L.
Ca_18944_v3 Cicer arietinum L.
CBR_g16049 Chara braunii
Cc04_g10880 Coffea canephora
CDE04G0396 Ceratophyllum demersum
CDE04G1301 Ceratophyllum demersum
CDE04G2317 Ceratophyllum demersum
Cfa000659 Carpinus fangiana
Ciclev10014195m.g Citrus clementina
CiPaw.10G061900 Carya illinoinensis
ClCG09G011850 Citrullus lanatus
COL.COLO4_18025 Corchorus olitorius
Cpa.g.sc30.122 Carica papaya
CsaV3_5G015760 Cucumis sativus L.
CSS0018526 Camellia sinensis var. sinensis
CSS0032692 Camellia sinensis var. sinensis
DCAR_026905 Daucus carota
Dinv04263 Davidia involucrata
Dinv06304 Davidia involucrata
Dinv16431 Davidia involucrata
Duzib248G0683 Durio zibethinus
ECA233G2209 Erigeron canadensis
EL10Ac2g04300 Beta vulgaris
Eucgr.I01567 Eucalyptus grandis
FAN12G3376 Fragaria x ananassa
FAN17G1136 Fragaria x ananassa
FAN22G0965 Fragaria x ananassa
FvH4_4g05080 Fragaria vesca
Glyma.13G054500 Glycine max
Glyma.19G032700 Glycine max
Gohir.A12G049000 Gossypium hirsutum
Gohir.D12G047700 Gossypium hirsutum
Gorai.008G050400 Gossypium raimondii
GSVIVG01032944001 Vitis vinifera
HanXRQChr04g0121291 Helianthus annuus
HanXRQChr12g0366411 Helianthus annuus
Haze_06165 Corylus avellana
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla
HPP92_024644 Vanilla planifolia
Lalb_Chr19g0135221 Lupinus albus
Lj3A850G96 Lonicera japonica
Lj3g0004583 Lotus japonicus
LjContig00564g0002415 Lotus japonicus
LjContig00564g0005363 Lotus japonicus
LjContig00564g0005645 Lotus japonicus
Lsat_1_v5_gn_8_33541 Lactuca sativa
Manes.16G050600 Manihot esculenta
Mapoly0306s0002 Marchantia polymorpha
MBI07_g42017_MAGBIO Magnolia biondii
MD13G1224700 Malus domestica
MD16G1229900 Malus domestica
Medtr4g078330 Medicago truncatula
MELO3C026444.2 Cucumis melo
Migut.E00612 Erythranthe guttata
Migut.E00705 Erythranthe guttata
Nitab4.5_0000036g0080 Nicotiana tabacum
Nitab4.5_0010326g0010 Nicotiana tabacum
Nn3g21093 Nelumbo nucifera
Oeu021359.1 Olea europaea
Oeu021362.1 Olea europaea
Os01g0103700 Oryza sativa ssp. japonica
Os01g0188200 Oryza sativa ssp. japonica
Peaxi162Scf00449g00320 Petunia axillaris
Peaxi162Scf00449g00321 Petunia axillaris
PGR142G3977 Punica granatum
PGSC0003DMG400003329 Solanum tuberosum
Phvul.004G026300 Phaseolus vulgaris
Phvul.005G124450 Phaseolus vulgaris
Phvul.005G124501 Phaseolus vulgaris
Phvul.005G124551 Phaseolus vulgaris
Potri.018G118800 Populus trichocarpa
Pp3c21_2460 Physcomitrium patens
Prupe.3G104300 Prunus persica
Psat2g088000 Pisum sativum
Psat7g167160 Pisum sativum
PSO017G0156 Papaver somniferum
PSO161G0046 Papaver somniferum
PSO478G1937 Papaver somniferum
PSO478G4754 Papaver somniferum
QL04p014466 Quercus lobata
QL04p014830 Quercus lobata
RcHm_v2.0_Chr1g0336851 Rosa chinensis
RcHm_v2.0_Chr4g0396011 Rosa chinensis
Rhsim01G0101500 Rhododendron simsii
Rhsim02G0134800 Rhododendron simsii
Sabra18G0102400 Salix brachista
Sc10g0002790 Simmondsia chinensis
Sed0018634 Sechium edule
SEGI_12689 Sequoiadendron giganteum
SEGI_31831 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14263 Striga asiatica
SGA_v2.0_scaffold99G29470 Striga asiatica
SHI28139 Sapria himalayana
SHI28140 Sapria himalayana
SHI28141 Sapria himalayana
SMO111G0127 Selaginella moellendorffii
Solyc02g064590.2 Solanum lycopersicum
Solyc02g064620.2 Solanum lycopersicum
Sopen02g014720 Solanum pennellii
Sp7g18520 Schrenkiella parvula
TAR622G1187 Trochodendron aralioides
Thecc.02G004800 Theobroma cacao
Thhalv10024260m.g Eutrema salsugineum
TPR.G23000 Trifolium pratense
TPR.G940 Trifolium pratense
TWI63G1138 Tripterygium wilfordii
unitig_46.g18488 Utricularia gibba
vmacro15931 Vaccinium macrocarpon
VMungo0464G0163 Vigna mungo
Zm00001eb126950 Zea mays

User provided reference genes

Program Settings