Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p45270 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_362.2921 Anthoceros agrestis
Actinidia18565 Actinidia chinensis
Ah.04g163600 Amaranthus hybridus
AL5G32800 Arabidopsis lyrata
Aqoxy116s006 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4XHC1Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9WDPE Arachis hypogaea
AT3G52210 Arabidopsis thaliana
ATR0820G057 Amborella trichopoda
Atru.chr12.947 Acer truncatum
AUR62027438 Chenopodium quinoa
AUR62031261 Chenopodium quinoa
BcaC07g39591 Brassica carinata
BolC8t50362H Brassica oleracea
BraA09t39990Z Brassica rapa
C08p27450 Brassica napus
CAN.G135.55 Capsicum annuum
CANSAT56G4280 Cannabis sativa
CARHR161970 Cardamine hirsuta
Carub.0005s1857 Capsella rubella
Ca_16691_v3 Cicer arietinum L.
CBR_g52011 Chara braunii
CBR_g52013 Chara braunii
Cc02_g10340 Coffea canephora
CDE06G1534 Ceratophyllum demersum
Cfa011211 Carpinus fangiana
Ciclev10031936m.g Citrus clementina
CiPaw.13G035400 Carya illinoinensis
ClCG05G021540 Citrullus lanatus
COL.COLO4_08828 Corchorus olitorius
Cpa.g.sc128.59 Carica papaya
CsaV3_5G035710 Cucumis sativus L.
CSS0009082 Camellia sinensis var. sinensis
CSS0009425 Camellia sinensis var. sinensis
DCAR_006375 Daucus carota
Dinv20853 Davidia involucrata
Duzib128G0241 Durio zibethinus
ECA238G1340 Erigeron canadensis
Eucgr.G02721 Eucalyptus grandis
FAN01G2594 Fragaria x ananassa
FAN03G2263 Fragaria x ananassa
FAN06G1723 Fragaria x ananassa
FAN06G3957 Fragaria x ananassa
FAN10G2184 Fragaria x ananassa
FAN10G2400 Fragaria x ananassa
FvH4_7g18320 Fragaria vesca
Glyma.04G237200 Glycine max
Glyma.06G127000 Glycine max
Gohir.A08G081062 Gossypium hirsutum
Gohir.A10G199300 Gossypium hirsutum
Gohir.D01G124450 Gossypium hirsutum
Gohir.D03G068501 Gossypium hirsutum
Gohir.D03G093766 Gossypium hirsutum
Gohir.D04G093032 Gossypium hirsutum
Gohir.D06G053475 Gossypium hirsutum
Gohir.D06G134001 Gossypium hirsutum
Gohir.D07G146901 Gossypium hirsutum
Gohir.D07G155000 Gossypium hirsutum
Gohir.D08G110908 Gossypium hirsutum
Gohir.D08G190266 Gossypium hirsutum
Gohir.D10G131700 Gossypium hirsutum
Gohir.D10G137832 Gossypium hirsutum
Gohir.D10G206600 Gossypium hirsutum
Gohir.D10G207400 Gossypium hirsutum
Gohir.D11G198933 Gossypium hirsutum
Gohir.D12G084701 Gossypium hirsutum
Gohir.D13G119550 Gossypium hirsutum
Gorai.003G092200 Gossypium raimondii
Gorai.004G121800 Gossypium raimondii
Gorai.007G213100 Gossypium raimondii
Gorai.008G094800 Gossypium raimondii
Gorai.009G343200 Gossypium raimondii
Gorai.010G076900 Gossypium raimondii
Gorai.010G198900 Gossypium raimondii
Gorai.011G145400 Gossypium raimondii
Gorai.011G233100 Gossypium raimondii
GSVIVG01034681001 Vitis vinifera
GSVIVG01034683001 Vitis vinifera
HanXRQChr14g0456261 Helianthus annuus
Haze_02635 Corylus avellana
Hma1.2p1_0949F.1_g240570 Hydrangea macrophylla
Hma1.2p1_3060F.1_g332248 Hydrangea macrophylla
HPP92_011881 Vanilla planifolia
HPP92_027323 Vanilla planifolia
Hund06751 Selenicereus undatus
Hund06755 Selenicereus undatus
Lalb_Chr08g0240391 Lupinus albus
Lj1g0019138 Lotus japonicus
Lj3A933T41 Lonicera japonica
Lsat_1_v5_gn_2_102920 Lactuca sativa
Lsat_1_v5_gn_7_108520 Lactuca sativa
Manes.10G054300 Manihot esculenta
Mapoly0006s0044 Marchantia polymorpha
Mapoly0132s0017 Marchantia polymorpha
MBI17_g12066_MAGBIO Magnolia biondii
MD01G1099500 Malus domestica
MD07G1166400 Malus domestica
MD16G1171900 Malus domestica
Medtr3g091140 Medicago truncatula
MELO3C034035.2 Cucumis melo
Migut.F00921 Erythranthe guttata
MSTRG.27517 Avicennia marina
Nitab4.5_0000593g0090 Nicotiana tabacum
Nitab4.5_0003408g0080 Nicotiana tabacum
Nn6g35094 Nelumbo nucifera
Oeu026555.1 Olea europaea
Os02g0780600 Oryza sativa ssp. japonica
Os04g0526200 Oryza sativa ssp. japonica
Peaxi162Scf00398g00615 Petunia axillaris
PGR142G1077 Punica granatum
PGSC0003DMG400027352 Solanum tuberosum
Phvul.009G055100 Phaseolus vulgaris
Potri.010G233100 Populus trichocarpa
Pp3c11_2020 Physcomitrium patens
Pp3c7_24280 Physcomitrium patens
PRCOL_00000315 Prasinoderma coloniale
Prupe.2G205200 Prunus persica
Psat5g077960 Pisum sativum
PSO063G1974 Papaver somniferum
PSO339G2013 Papaver somniferum
QL04p040536 Quercus lobata
RcHm_v2.0_Chr1g0362021 Rosa chinensis
Rhsim03G0109900 Rhododendron simsii
Sabra10G0180800 Salix brachista
SalBow4G0518 Salvia bowleyana
SalBow4G0968 Salvia bowleyana
Sc09g0005630 Simmondsia chinensis
Sed0021935 Sechium edule
SEGI_35484 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06503 Striga asiatica
SMO144G0142 Selaginella moellendorffii
Solyc11g007700.2 Solanum lycopersicum
Sopen11g003560 Solanum pennellii
Sp5g10060 Schrenkiella parvula
TAR623G0871 Trochodendron aralioides
THA.LOC104806007 Tarenaya hassleriana
Thecc.10G094900 Theobroma cacao
Thhalv10010496m.g Eutrema salsugineum
TPR.G17296 Trifolium pratense
TPR.G17300 Trifolium pratense
TPR.G33637 Trifolium pratense
TPR.G33662 Trifolium pratense
TWI63G0166 Tripterygium wilfordii
unitig_736.g22532 Utricularia gibba
vmacro07214 Vaccinium macrocarpon
VMungo1309G2659 Vigna mungo
Zm00001eb076770 Zea mays
Zm00001eb217850 Zea mays
Zm00001eb311040 Zea mays

User provided reference genes

Program Settings