Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p07510 Brassica napus
Aa31LG5G23380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.797 Anthoceros agrestis
Actinidia11507 Actinidia chinensis
Actinidia27261 Actinidia chinensis
Actinidia29031 Actinidia chinensis
Ah.08g209270 Amaranthus hybridus
Ah.15g089990 Amaranthus hybridus
AL4G35830 Arabidopsis lyrata
Aqoxy1G01266 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GGR1PK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3KH6W Arachis hypogaea
AT2G38550 Arabidopsis thaliana
ATR1127G197 Amborella trichopoda
Atru.chr8.110 Acer truncatum
AUR62006421 Chenopodium quinoa
AUR62029770 Chenopodium quinoa
BcaB02g09182 Brassica carinata
BcaC02g12007 Brassica carinata
BolC4t22488H Brassica oleracea
BraA05t19716Z Brassica rapa
C04p08990 Brassica napus
CAN.G120.2 Capsicum annuum
CANSAT56G1492 Cannabis sativa
CARHR035360 Cardamine hirsuta
CARHR133230 Cardamine hirsuta
Carub.0004s2054 Capsella rubella
Ca_02264_v3 Cicer arietinum L.
CBR_g47126 Chara braunii
Cc06_g00390 Coffea canephora
CDE06G1356 Ceratophyllum demersum
CDE07G0884 Ceratophyllum demersum
Cfa017027 Carpinus fangiana
Ciclev10012212m.g Citrus clementina
CiPaw.09G221700 Carya illinoinensis
ClCG04G006350 Citrullus lanatus
COL.COLO4_09227 Corchorus olitorius
Cpa.g.sc0.102 Carica papaya
CsaV3_4G027190 Cucumis sativus L.
CSS0017588 Camellia sinensis var. sinensis
CSS0023047 Camellia sinensis var. sinensis
CSS0023237 Camellia sinensis var. sinensis
DCAR_015337 Daucus carota
DCAR_023974 Daucus carota
Dinv16973 Davidia involucrata
Dinv25347 Davidia involucrata
Duzib151G0737 Durio zibethinus
Duzib268G1093 Durio zibethinus
ECA236G0648 Erigeron canadensis
EL10Ac7g17106 Beta vulgaris
Eucgr.K01286 Eucalyptus grandis
FAN02G3876 Fragaria x ananassa
FAN05G3806 Fragaria x ananassa
FAN09G4599 Fragaria x ananassa
FAN14G5820 Fragaria x ananassa
FvH4_6g09820 Fragaria vesca
Glyma.07G108500 Glycine max
Glyma.09G274500 Glycine max
Glyma.18G213500 Glycine max
Gohir.A02G003100 Gossypium hirsutum
Gohir.A10G151100 Gossypium hirsutum
Gohir.D02G003500 Gossypium hirsutum
Gohir.D10G115200 Gossypium hirsutum
Gorai.005G004000 Gossypium raimondii
Gorai.011G126900 Gossypium raimondii
GSVIVG01030178001 Vitis vinifera
HanXRQChr06g0181041 Helianthus annuus
HanXRQChr16g0510491 Helianthus annuus
Haze_21179 Corylus avellana
Hma1.2p1_0174F.1_g076810 Hydrangea macrophylla
HPP92_007532 Vanilla planifolia
HPP92_007533 Vanilla planifolia
HPP92_018086 Vanilla planifolia
Hund03697 Selenicereus undatus
Lalb_Chr03g0043881 Lupinus albus
Lalb_Chr19g0123941 Lupinus albus
Lj1g0007503 Lotus japonicus
Lj1P808T26 Lonicera japonica
Lj2A58T94 Lonicera japonica
Lj3A941G100 Lonicera japonica
Lsat_1_v5_gn_8_110501 Lactuca sativa
Manes.08G170900 Manihot esculenta
Manes.09G118300 Manihot esculenta
Mapoly0006s0095 Marchantia polymorpha
MBI15_g01605_MAGBIO Magnolia biondii
MD04G1175000 Malus domestica
MD12G1188700 Malus domestica
Medtr7g073340 Medicago truncatula
MELO3C025223.2 Cucumis melo
Migut.J00034 Erythranthe guttata
MSTRG.18940 Avicennia marina
Nitab4.5_0000048g0050 Nicotiana tabacum
Nitab4.5_0005145g0010 Nicotiana tabacum
Nn2g10294 Nelumbo nucifera
Nn5g26844 Nelumbo nucifera
Oeu026947.1 Olea europaea
Os01g0821700 Oryza sativa ssp. japonica
Peaxi162Scf00732g00258 Petunia axillaris
PGSC0003DMG400030019 Solanum tuberosum
Phvul.008G082300 Phaseolus vulgaris
Potri.006G108700 Populus trichocarpa
Potri.016G137200 Populus trichocarpa
Pp3c18_6510 Physcomitrium patens
Pp3c19_13340 Physcomitrium patens
Pp3c21_18160 Physcomitrium patens
Prupe.6G294000 Prunus persica
Psat3g119400 Pisum sativum
PSO017G3746 Papaver somniferum
PSO170G1670 Papaver somniferum
PSO339G2830 Papaver somniferum
PSO384G1710 Papaver somniferum
QL07p032047 Quercus lobata
RcHm_v2.0_Chr3g0460431 Rosa chinensis
Rhsim05G0230900 Rhododendron simsii
Sabra04G0153800 Salix brachista
Sabra06G0084700 Salix brachista
SalBow5G3051 Salvia bowleyana
SalBow5G5006 Salvia bowleyana
Sc07g0005940 Simmondsia chinensis
Sc20g0007000 Simmondsia chinensis
Sed0012391 Sechium edule
Sed0014033 Sechium edule
SEGI_23067 Sequoiadendron giganteum
SGA_v2.0_scaffold373G50186 Striga asiatica
SGA_v2.0_scaffold85G26605 Striga asiatica
SMO285G0004 Selaginella moellendorffii
SMO348G0081 Selaginella moellendorffii
SMO356G0722 Selaginella moellendorffii
Solyc09g015650.4 Solanum lycopersicum
Sopen03g003180 Solanum pennellii
Sopen09g009840 Solanum pennellii
Sopen11g017880 Solanum pennellii
Sp4g20880 Schrenkiella parvula
TAR267G0003 Trochodendron aralioides
TAR633G0630 Trochodendron aralioides
TAR636G3595 Trochodendron aralioides
THA.LOC104806171 Tarenaya hassleriana
THA.LOC104806644 Tarenaya hassleriana
THA.LOC104823353 Tarenaya hassleriana
Thecc.04G151200 Theobroma cacao
Thhalv10016889m.g Eutrema salsugineum
TPR.G14115 Trifolium pratense
TPR.G14118 Trifolium pratense
TWI53G0108 Tripterygium wilfordii
TWI77G0812 Tripterygium wilfordii
unitig_749.g14093 Utricularia gibba
vmacro20371 Vaccinium macrocarpon
VMungo1383G1190 Vigna mungo
Zm00001eb149540 Zea mays
Zm00001eb368840 Zea mays

User provided reference genes

Program Settings