Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08630 Brassica napus
A10p21440 Brassica napus
Aa31LG9G15390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis
Actinidia03393 Actinidia chinensis
Actinidia25945 Actinidia chinensis
Ah.04g153990 Amaranthus hybridus
AL6G29260 Arabidopsis lyrata
Aqoxy3G03106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea
AT5G18070 Arabidopsis thaliana
ATR0149G020 Amborella trichopoda
ATR0829G014 Amborella trichopoda
Atru.BG.31.p Acer truncatum
Atru.chr6.1775 Acer truncatum
AUR62001104 Chenopodium quinoa
AUR62007230 Chenopodium quinoa
AUR62018770 Chenopodium quinoa
BcaB01g01790 Brassica carinata
BcaB01g05173 Brassica carinata
BcaB01g06395 Brassica carinata
BcaB08g36711 Brassica carinata
BcaC04g18728 Brassica carinata
BolC3t13493H Brassica oleracea
BolC9t58736H Brassica oleracea
BraA03t10187Z Brassica rapa
BraA10t44206Z Brassica rapa
C03p10070 Brassica napus
C09p58920 Brassica napus
CAN.G799.17 Capsicum annuum
CANSAT80G1132 Cannabis sativa
CARHR185470 Cardamine hirsuta
CARHR195050 Cardamine hirsuta
Carub.0006s1636 Capsella rubella
Ca_24631_v3 Cicer arietinum L.
CBR_g36832 Chara braunii
Cc05_g03290 Coffea canephora
Cc05_g03300 Coffea canephora
CDE08G0647 Ceratophyllum demersum
Ciclev10031124m.g Citrus clementina
CiPaw.12G060300 Carya illinoinensis
ClCG03G017340 Citrullus lanatus
COL.COLO4_17563 Corchorus olitorius
Cpa.g.sc39.114 Carica papaya
Cre08.g379700 Chlamydomonas reinhardtii
CsaV3_1G038770 Cucumis sativus L.
CSS0006893 Camellia sinensis var. sinensis
CSS0027312 Camellia sinensis var. sinensis
CSS0030337 Camellia sinensis var. sinensis
DCAR_005602 Daucus carota
Dinv25184 Davidia involucrata
Dinv28916 Davidia involucrata
Duzib213G0438 Durio zibethinus
ECA233G2813 Erigeron canadensis
EL10Ac5g12196 Beta vulgaris
Eucgr.D02153 Eucalyptus grandis
FAN04G2254 Fragaria x ananassa
FAN08G3652 Fragaria x ananassa
FAN13G2236 Fragaria x ananassa
FAN18G2324 Fragaria x ananassa
FvH4_5g21180 Fragaria vesca
Glyma.01G201300 Glycine max
Glyma.01G201400 Glycine max
Glyma.07G096600 Glycine max
Glyma.16G093100 Glycine max
Glyma.16G093267 Glycine max
Glyma.16G093333 Glycine max
Glyma.20G095000 Glycine max
Gohir.A01G044000 Gossypium hirsutum
Gohir.D01G034800 Gossypium hirsutum
Gorai.002G043000 Gossypium raimondii
GSVIVG01011242001 Vitis vinifera
GSVIVG01013229001 Vitis vinifera
HanXRQChr14g0455871 Helianthus annuus
Haze_07894 Corylus avellana
Haze_08299 Corylus avellana
Haze_08300 Corylus avellana
Haze_08302 Corylus avellana
Haze_08303 Corylus avellana
Haze_08304 Corylus avellana
Haze_26496 Corylus avellana
HPP92_017500 Vanilla planifolia
Hund14430 Selenicereus undatus
Lalb_Chr16g0379231 Lupinus albus
Lj2g0012431 Lotus japonicus
Lj3A396G10 Lonicera japonica
Lsat_1_v5_gn_6_66461 Lactuca sativa
Manes.15G172800 Manihot esculenta
Mapoly0074s0077 Marchantia polymorpha
MBI04_g29834_MAGBIO Magnolia biondii
MBI04_g44837_MAGBIO Magnolia biondii
MCO08G085 Micromonas commoda
MD06G1040100 Malus domestica
MD09G1284100 Malus domestica
MD16G1269200 Malus domestica
Medtr5g013970 Medicago truncatula
MELO3C015301.2 Cucumis melo
Migut.E00798 Erythranthe guttata
Migut.E00912 Erythranthe guttata
MSTRG.1970 Avicennia marina
Nitab4.5_0002055g0140 Nicotiana tabacum
Nitab4.5_0006693g0050 Nicotiana tabacum
Nn1g00613 Nelumbo nucifera
Nn3g19414 Nelumbo nucifera
Oeu039341.2 Olea europaea
Os07g0195400 Oryza sativa ssp. japonica
Peaxi162Scf00084g00922 Petunia axillaris
PGR031G1993 Punica granatum
PGSC0003DMG400024224 Solanum tuberosum
Phvul.002G003600 Phaseolus vulgaris
Potri.001G146900 Populus trichocarpa
Pp3c15_140 Physcomitrium patens
PRCOL_00000375 Prasinoderma coloniale
Prupe.5G046300 Prunus persica
Psat2g174720 Pisum sativum
PSO017G5366 Papaver somniferum
PSO063G1154 Papaver somniferum
PSO541G5086 Papaver somniferum
QL12p007112 Quercus lobata
RcHm_v2.0_Chr7g0208321 Rosa chinensis
Rhsim09G0128800 Rhododendron simsii
Sabra01G0115600 Salix brachista
SalBow6G1446 Salvia bowleyana
Sc07g0008830 Simmondsia chinensis
Sed0006321 Sechium edule
SEGI_00537 Sequoiadendron giganteum
SEGI_05540 Sequoiadendron giganteum
SEGI_27182 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37418 Striga asiatica
SGA_v2.0_scaffold18G08384 Striga asiatica
SHI01417 Sapria himalayana
SHI01420 Sapria himalayana
SMO174G0171 Selaginella moellendorffii
Solyc08g077270.4 Solanum lycopersicum
Sopen08g025850 Solanum pennellii
Sp6g26230 Schrenkiella parvula
TAR375G0042 Trochodendron aralioides
THA.LOC104814429 Tarenaya hassleriana
Thecc.03G234000 Theobroma cacao
Thecc.07G110200 Theobroma cacao
Thhalv10013080m.g Eutrema salsugineum
TPR.G6765 Trifolium pratense
TWI81G0724 Tripterygium wilfordii
unitig_21.g20378 Utricularia gibba
vmacro00352 Vaccinium macrocarpon
vmacro21667 Vaccinium macrocarpon
vmacro21668 Vaccinium macrocarpon
VMungo1215G2917 Vigna mungo
Zm00001eb119880 Zea mays

User provided reference genes

Program Settings