Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20120 Brassica napus
Aa31LG4G5890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis
Actinidia15407 Actinidia chinensis
Actinidia28598 Actinidia chinensis
Actinidia37925 Actinidia chinensis
Ah.02g126690 Amaranthus hybridus
AL2G35650 Arabidopsis lyrata
Aqoxy3G00621 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea
AT1G75670 Arabidopsis thaliana
ATR0068G029 Amborella trichopoda
ATR0585G020 Amborella trichopoda
ATR0585G124 Amborella trichopoda
Atru.chr13.322 Acer truncatum
Atru.chr2.1521 Acer truncatum
AUR62035440 Chenopodium quinoa
AUR62035728 Chenopodium quinoa
BcaC03g15607 Brassica carinata
BcaC08g47055 Brassica carinata
BolC2t09323H Brassica oleracea
BolC6t40000H Brassica oleracea
BraA02t07047Z Brassica rapa
C02p33810 Brassica napus
CAN.G103.3 Capsicum annuum
CAN.G230.10 Capsicum annuum
CANSAT78G0251 Cannabis sativa
CARHR069060 Cardamine hirsuta
Carub.0002s2250 Capsella rubella
Ca_08030_v3 Cicer arietinum L.
CBR_g74690 Chara braunii
Cc10_g01890 Coffea canephora
CDE05G3598 Ceratophyllum demersum
CDE12G0586 Ceratophyllum demersum
Cfa013928 Carpinus fangiana
Ciclev10002352m.g Citrus clementina
CiPaw.08G064600 Carya illinoinensis
ClCG05G018480 Citrullus lanatus
ClCG11G002570 Citrullus lanatus
COL.COLO4_20267 Corchorus olitorius
COL.COLO4_26170 Corchorus olitorius
Cpa.g.sc26.26 Carica papaya
Cre02.g086750 Chlamydomonas reinhardtii
CsaV3_3G045700 Cucumis sativus L.
CSS0031211 Camellia sinensis var. sinensis
DCAR_008455 Daucus carota
Dinv31828 Davidia involucrata
Dinv39502 Davidia involucrata
Duzib116G0591 Durio zibethinus
ECA236G4786 Erigeron canadensis
EL10Ac1g02264 Beta vulgaris
Eucgr.E00855 Eucalyptus grandis
Eucgr.F02088 Eucalyptus grandis
FAN15G2157 Fragaria x ananassa
FAN15G3167 Fragaria x ananassa
FAN24G1417 Fragaria x ananassa
FAN27G0705 Fragaria x ananassa
FAN27G0910 Fragaria x ananassa
FvH4_2g17590 Fragaria vesca
Glyma.09G246500 Glycine max
Glyma.18G246500 Glycine max
Gohir.A02G093500 Gossypium hirsutum
Gohir.A07G207200 Gossypium hirsutum
Gohir.A07G207300 Gossypium hirsutum
Gohir.A09G014000 Gossypium hirsutum
Gohir.D02G097900 Gossypium hirsutum
Gorai.005G111600 Gossypium raimondii
GSVIVG01009867001 Vitis vinifera
HanXRQChr02g0039471 Helianthus annuus
HanXRQChr10g0300951 Helianthus annuus
Haze_22610 Corylus avellana
Hma1.2p1_0312F.1_g121470 Hydrangea macrophylla
Hma1.2p1_0386F.1_g141900 Hydrangea macrophylla
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla
HPP92_017328 Vanilla planifolia
Lalb_Chr01g0021631 Lupinus albus
Lalb_Chr03g0040521 Lupinus albus
Lj1g0015493 Lotus japonicus
Lj4A795G31 Lonicera japonica
Lsat_1_v5_gn_8_80440 Lactuca sativa
Manes.05G149800 Manihot esculenta
Mapoly0115s0026 Marchantia polymorpha
MBI05_g38365_MAGBIO Magnolia biondii
MCO12G415 Micromonas commoda
MD05G1155200 Malus domestica
MD10G1149500 Malus domestica
Medtr7g080860 Medicago truncatula
MELO3C003766.2 Cucumis melo
Migut.C00815 Erythranthe guttata
Migut.G00984 Erythranthe guttata
MSTRG.1208 Avicennia marina
Nitab4.5_0001242g0070 Nicotiana tabacum
Nitab4.5_0014171g0010 Nicotiana tabacum
Nn1g08637 Nelumbo nucifera
Nn5g29279 Nelumbo nucifera
Nn5g29282 Nelumbo nucifera
Oeu024522.1 Olea europaea
Oeu024529.1 Olea europaea
Oeu056857.1 Olea europaea
Os06g0168400 Oryza sativa ssp. japonica
Os12g0533600 Oryza sativa ssp. japonica
Peaxi162Scf00186g00023 Petunia axillaris
PGR031G1064 Punica granatum
PGR031G3408 Punica granatum
PGSC0003DMG400008458 Solanum tuberosum
PGSC0003DMG400019052 Solanum tuberosum
Phvul.008G050600 Phaseolus vulgaris
Potri.002G024601 Populus trichocarpa
Potri.005G236800 Populus trichocarpa
Pp3c15_23380 Physcomitrium patens
PRCOL_00000152 Prasinoderma coloniale
Prupe.8G188100 Prunus persica
Psat6g222440 Pisum sativum
PSO541G0679 Papaver somniferum
PSO675G7262 Papaver somniferum
PSO675G8856 Papaver somniferum
QL02p011069 Quercus lobata
RcHm_v2.0_Chr6g0282531 Rosa chinensis
Rhsim06G0023300 Rhododendron simsii
Sabra05G0183100 Salix brachista
SalBow8G2430 Salvia bowleyana
Sc02g0008460 Simmondsia chinensis
Sed0001853 Sechium edule
Sed0010580 Sechium edule
Sed0021847 Sechium edule
SEGI_15858 Sequoiadendron giganteum
SEGI_28115 Sequoiadendron giganteum
SEGI_29847 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05895 Striga asiatica
SMO356G0424 Selaginella moellendorffii
Solyc05g054140.3 Solanum lycopersicum
Sopen05g032630 Solanum pennellii
Sp5g30770 Schrenkiella parvula
TAR381G0914 Trochodendron aralioides
TAR625G0428 Trochodendron aralioides
THA.LOC104809415 Tarenaya hassleriana
Thecc.08G041400 Theobroma cacao
Thhalv10019169m.g Eutrema salsugineum
TPR.G15148 Trifolium pratense
TWI34G1799 Tripterygium wilfordii
TWI56G1488 Tripterygium wilfordii
unitig_8.g4914 Utricularia gibba
vmacro14381 Vaccinium macrocarpon
vmacro21713 Vaccinium macrocarpon
VMungo1383G3289 Vigna mungo
Zm00001eb410680 Zea mays

User provided reference genes

Program Settings