Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00940 Brassica napus
A09p21730 Brassica napus
Aa31LG6G15210 Aethionema arabicum
Ah.02g126160 Amaranthus hybridus
Ah.03g142010 Amaranthus hybridus
AL7G12330 Arabidopsis lyrata
AL7G13610 Arabidopsis lyrata
Aqoxy6G00721 Aquilegia oxysepala
AT4G40020 Arabidopsis thaliana
Atru.chr3.1354 Acer truncatum
AUR62003257 Chenopodium quinoa
AUR62027212 Chenopodium quinoa
BcaB02g10025 Brassica carinata
BcaNung00932 Brassica carinata
BcaNung00933 Brassica carinata
BolC1t00104H Brassica oleracea
BolC4t25048H Brassica oleracea
BraA01t00092Z Brassica rapa
BraA09t37775Z Brassica rapa
C01p01070 Brassica napus
C04p34940 Brassica napus
CAN.G33.13 Capsicum annuum
CAN.G712.13 Capsicum annuum
CAN.G905.19 Capsicum annuum
CANSAT01G1426 Cannabis sativa
CARHR246650 Cardamine hirsuta
Carub.0007s0199 Capsella rubella
Ca_16511_v3 Cicer arietinum L.
Cc07_g14660 Coffea canephora
CDE10G1352 Ceratophyllum demersum
Cfa002603 Carpinus fangiana
Ciclev10026989m.g Citrus clementina
CiPaw.03G145300 Carya illinoinensis
CiPaw.04G103200 Carya illinoinensis
ClCG07G017420 Citrullus lanatus
COL.COLO4_27289 Corchorus olitorius
Cpa.g.sc55.78 Carica papaya
CsaV3_4G004650 Cucumis sativus L.
CsaV3_UNG131010 Cucumis sativus L.
CsaV3_UNG154160 Cucumis sativus L.
CsaV3_UNG223510 Cucumis sativus L.
CsaV3_UNG223520 Cucumis sativus L.
CSS0021212 Camellia sinensis var. sinensis
CSS0046927 Camellia sinensis var. sinensis
DCAR_003473 Daucus carota
DCAR_014205 Daucus carota
DCAR_016618 Daucus carota
Dinv08856 Davidia involucrata
Dinv13228 Davidia involucrata
Duzib147G1409 Durio zibethinus
Duzib264G0159 Durio zibethinus
ECA238G0370 Erigeron canadensis
EL10Ac6g14002 Beta vulgaris
EL10As13g24047 Beta vulgaris
Eucgr.H04743 Eucalyptus grandis
FAN19G3038 Fragaria x ananassa
FAN23G1536 Fragaria x ananassa
FAN28G2730 Fragaria x ananassa
FvH4_1g20290 Fragaria vesca
Glyma.11G241600 Glycine max
Glyma.18G015400 Glycine max
Gohir.A02G129300 Gossypium hirsutum
Gohir.A10G085000 Gossypium hirsutum
Gohir.A11G051150 Gossypium hirsutum
Gohir.A11G204800 Gossypium hirsutum
Gohir.D10G104000 Gossypium hirsutum
Gohir.D11G054550 Gossypium hirsutum
Gohir.D11G219100 Gossypium hirsutum
Gorai.007G059800 Gossypium raimondii
Gorai.011G113500 Gossypium raimondii
HanXRQChr10g0314761 Helianthus annuus
HanXRQChr14g0445041 Helianthus annuus
HanXRQChr14g0445051 Helianthus annuus
HanXRQChr14g0445061 Helianthus annuus
HanXRQChr17g0546381 Helianthus annuus
HanXRQChr17g0546391 Helianthus annuus
Haze_24857 Corylus avellana
HPP92_002322 Vanilla planifolia
HPP92_016777 Vanilla planifolia
HPP92_027242 Vanilla planifolia
Lalb_Chr08g0230971 Lupinus albus
Lalb_Chr11g0075431 Lupinus albus
Lj2C540T9 Lonicera japonica
Lj4A899T58 Lonicera japonica
Lj6g0021918 Lotus japonicus
Lsat_1_v5_gn_2_66121 Lactuca sativa
MD03G1184100 Malus domestica
MD11G1200900 Malus domestica
Medtr3g086890 Medicago truncatula
MELO3C017599.2 Cucumis melo
Migut.L00159 Erythranthe guttata
MSTRG.3758 Avicennia marina
Nitab4.5_0000571g0050 Nicotiana tabacum
Nitab4.5_0001874g0100 Nicotiana tabacum
Nitab4.5_0006824g0010 Nicotiana tabacum
Nn1g05445 Nelumbo nucifera
Oeu012397.1 Olea europaea
Oeu033042.1 Olea europaea
Oeu056639.1 Olea europaea
Os03g0189300 Oryza sativa ssp. japonica
Os08g0481100 Oryza sativa ssp. japonica
Peaxi162Scf00383g01014 Petunia axillaris
Peaxi162Scf00569g00049 Petunia axillaris
PGR102G2692 Punica granatum
PGSC0003DMG400016153 Solanum tuberosum
PGSC0003DMG400016794 Solanum tuberosum
PGSC0003DMG400020690 Solanum tuberosum
PGSC0003DMG400039193 Solanum tuberosum
PGSC0003DMG400046241 Solanum tuberosum
PGSC0003DMG400046492 Solanum tuberosum
Phvul.001G253600 Phaseolus vulgaris
Potri.005G072400 Populus trichocarpa
Potri.007G096600 Populus trichocarpa
Prupe.6G192500 Prunus persica
Psat2g012840 Pisum sativum
PSO302G0004 Papaver somniferum
PSO541G5545 Papaver somniferum
PSO675G9110 Papaver somniferum
QL06p048197 Quercus lobata
RcHm_v2.0_Chr2g0112431 Rosa chinensis
Rhsim08G0013200 Rhododendron simsii
Rhsim10G0167200 Rhododendron simsii
Sabra05G0059200 Salix brachista
Sabra07G0079900 Salix brachista
SalBow5G3597 Salvia bowleyana
Sc16g0000220 Simmondsia chinensis
Sed0005265 Sechium edule
Sed0023595 Sechium edule
SGA_v2.0_scaffold115G32166 Striga asiatica
Solyc07g009520.2 Solanum lycopersicum
Solyc11g010210.1 Solanum lycopersicum
Sopen05g029920 Solanum pennellii
Sopen11g004990 Solanum pennellii
Sp7g35850 Schrenkiella parvula
TAR376G0363 Trochodendron aralioides
THA.LOC104807862 Tarenaya hassleriana
THA.LOC104824888 Tarenaya hassleriana
Thecc.01G096300 Theobroma cacao
Thhalv10027577m.g Eutrema salsugineum
TPR.G16026 Trifolium pratense
TWI53G1075 Tripterygium wilfordii
TWI74G0620 Tripterygium wilfordii
unitig_32.g10703 Utricularia gibba
unitig_32.g11809 Utricularia gibba
unitig_748.g8651 Utricularia gibba
vmacro12982 Vaccinium macrocarpon
VMungo1383G3674 Vigna mungo
Zm00001eb006740 Zea mays
Zm00001eb199080 Zea mays
Zm00001eb401420 Zea mays

User provided reference genes

Program Settings