Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18920 Brassica napus
A07p29630 Brassica napus
A07p39700 Brassica napus
Aa31LG4G4160 Aethionema arabicum
Actinidia18931 Actinidia chinensis
Actinidia35090 Actinidia chinensis
Ah.11g048200 Amaranthus hybridus
AL2G33660 Arabidopsis lyrata
Aqoxy3G00287 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.94ZJ0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G56NCJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3S6I2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2WJJP Arachis hypogaea
AT1G73840 Arabidopsis thaliana
ATR1125G052 Amborella trichopoda
Atru.chr9.855 Acer truncatum
AUR62008463 Chenopodium quinoa
AUR62021632 Chenopodium quinoa
AUR62038113 Chenopodium quinoa
AUR62038115 Chenopodium quinoa
BcaB03g15090 Brassica carinata
BcaB03g15093 Brassica carinata
BcaB03g15096 Brassica carinata
BcaB03g15098 Brassica carinata
BcaB03g15731 Brassica carinata
BcaC08g45619 Brassica carinata
BcaNung06927 Brassica carinata
BolC2t09177H Brassica oleracea
BolC6t38494H Brassica oleracea
BolC6t39834H Brassica oleracea
BraA07t30604Z Brassica rapa
BraA07t31519Z Brassica rapa
C02p31460 Brassica napus
C06p33810 Brassica napus
C06p47990 Brassica napus
CAN.G1889.4 Capsicum annuum
CANSAT80G1182 Cannabis sativa
CANSAT80G2575 Cannabis sativa
CARHR066930 Cardamine hirsuta
Carub.0002s2060 Capsella rubella
Ca_15108_v3 Cicer arietinum L.
Ca_25442_v3 Cicer arietinum L.
Ca_25456_v3 Cicer arietinum L.
Cc04_g07080 Coffea canephora
CDE02G4219 Ceratophyllum demersum
CDE06G1062 Ceratophyllum demersum
CDE06G2845 Ceratophyllum demersum
Cfa019764 Carpinus fangiana
Ciclev10020493m.g Citrus clementina
CiPaw.16G086800 Carya illinoinensis
ClCG04G011130 Citrullus lanatus
COL.COLO4_11303 Corchorus olitorius
Cpa.g.sc3.508 Carica papaya
CsaV3_1G006630 Cucumis sativus L.
CSS0004173 Camellia sinensis var. sinensis
DCAR_015143 Daucus carota
DCAR_023206 Daucus carota
Dinv15680 Davidia involucrata
Dinv28107 Davidia involucrata
Duzib084G0074 Durio zibethinus
ECA238G2506 Erigeron canadensis
EL10Ac5g11063 Beta vulgaris
Eucgr.K02226 Eucalyptus grandis
FAN04G0770 Fragaria x ananassa
FAN08G1246 Fragaria x ananassa
FAN13G1851 Fragaria x ananassa
FAN18G2620 Fragaria x ananassa
FAN18G3139 Fragaria x ananassa
FvH4_3g36821 Fragaria vesca
FvH4_5g12080 Fragaria vesca
Glyma.05G234300 Glycine max
Glyma.08G041600 Glycine max
Glyma.10G040800 Glycine max
Glyma.13G127700 Glycine max
Gohir.A08G094762 Gossypium hirsutum
Gohir.A08G095000 Gossypium hirsutum
Gohir.A09G048000 Gossypium hirsutum
Gohir.A11G277050 Gossypium hirsutum
Gohir.D05G109701 Gossypium hirsutum
Gohir.D08G105600 Gossypium hirsutum
Gohir.D08G202000 Gossypium hirsutum
Gohir.D09G049200 Gossypium hirsutum
Gohir.D11G132850 Gossypium hirsutum
Gorai.004G113500 Gossypium raimondii
Gorai.006G060600 Gossypium raimondii
GSVIVG01008293001 Vitis vinifera
GSVIVG01008294001 Vitis vinifera
GSVIVG01014057001 Vitis vinifera
HanXRQChr06g0184711 Helianthus annuus
Haze_18683 Corylus avellana
Hma1.2p1_0701F.1_g205890 Hydrangea macrophylla
Hma1.2p1_2409F.1_g321510 Hydrangea macrophylla
HPP92_004808 Vanilla planifolia
HPP92_004811 Vanilla planifolia
HPP92_026105 Vanilla planifolia
HPP92_026106 Vanilla planifolia
Lalb_Chr05g0222491 Lupinus albus
Lalb_Chr09g0331081 Lupinus albus
Lj4g0022250 Lotus japonicus
Lsat_1_v5_gn_2_12261 Lactuca sativa
Manes.01G011100 Manihot esculenta
MBI02_g11379_MAGBIO Magnolia biondii
MD14G1227000 Malus domestica
Medtr8g104260 Medicago truncatula
MELO3C002087.2 Cucumis melo
Migut.I00881 Erythranthe guttata
MSTRG.11071 Avicennia marina
Nitab4.5_0000208g0330 Nicotiana tabacum
Nitab4.5_0000974g0090 Nicotiana tabacum
Nitab4.5_0009306g0010 Nicotiana tabacum
Nitab4.5_0012710g0020 Nicotiana tabacum
Nn3g17855 Nelumbo nucifera
Nn4g23854 Nelumbo nucifera
Oeu056801.1 Olea europaea
Oeu064714.1 Olea europaea
Os05g0513300 Oryza sativa ssp. japonica
Os05g0513350 Oryza sativa ssp. japonica
Peaxi162Scf00015g01034 Petunia axillaris
Peaxi162Scf00634g00318 Petunia axillaris
PGR044G1576 Punica granatum
PGSC0003DMG401005635 Solanum tuberosum
Phvul.007G154000 Phaseolus vulgaris
Potri.012G056200 Populus trichocarpa
Prupe.5G221700 Prunus persica
Psat7g010600 Pisum sativum
PSO017G0469 Papaver somniferum
PSO478G0599 Papaver somniferum
QL10p025417 Quercus lobata
RcHm_v2.0_Chr7g0185491 Rosa chinensis
Rhsim12G0143100 Rhododendron simsii
Sabra12G0039900 Salix brachista
Sc12g0007670 Simmondsia chinensis
Sed0008793 Sechium edule
SEGI_28516 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14831 Striga asiatica
SGA_v2.0_scaffold5G02571 Striga asiatica
Solyc03g119460.4 Solanum lycopersicum
Sopen03g038310 Solanum pennellii
Sp5g29040 Schrenkiella parvula
TAR629G2125 Trochodendron aralioides
THA.LOC104812144 Tarenaya hassleriana
Thecc.03G035700 Theobroma cacao
Thhalv10018702m.g Eutrema salsugineum
TPR.G32702 Trifolium pratense
TWI15G0834 Tripterygium wilfordii
unitig_8.g3895 Utricularia gibba
vmacro16446 Vaccinium macrocarpon
VMungo0720G2584 Vigna mungo
Zm00001eb292700 Zea mays
Zm00001eb375170 Zea mays

User provided reference genes

Program Settings